Difference between revisions of "ISOCITRATE-DEHYDROGENASE-NAD+-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCITRATE-DEHYDROGENASE-NAD+-RXN ISOCITRATE-DEHYDROGENASE-NAD+-RXN] == * direction: ** LEFT-TO-RIG...") |
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*** Assignment: AUTOMATED-NAME-MATCH | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] | * [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] | ||
** '''11''' reactions found over '''11''' reactions in the full pathway | ** '''11''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] | * [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] | ||
** '''9''' reactions found over '''9''' reactions in the full pathway | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
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* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23632 23632] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23632 23632] | ||
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* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P56472 P56472] | ** [http://www.uniprot.org/uniprot/P56472 P56472] | ||
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** [http://www.uniprot.org/uniprot/O13696 O13696] | ** [http://www.uniprot.org/uniprot/O13696 O13696] | ||
** [http://www.uniprot.org/uniprot/Q9USP8 Q9USP8] | ** [http://www.uniprot.org/uniprot/Q9USP8 Q9USP8] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00709 R00709] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=Isocitrate dehydrogenase, NAD-dependent}} | {{#set: common name=Isocitrate dehydrogenase, NAD-dependent}} | ||
| Line 76: | Line 76: | ||
{{#set: ec number=EC-1.1.1.41}} | {{#set: ec number=EC-1.1.1.41}} | ||
{{#set: gene associated=CHC_T00008852001_1|CHC_T00008852001|CHC_T00009162001_1|CHC_T00009293001|CHC_T00009293001_1|CHC_T00009162001}} | {{#set: gene associated=CHC_T00008852001_1|CHC_T00008852001|CHC_T00009162001_1|CHC_T00009293001|CHC_T00009293001_1|CHC_T00009162001}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY66-398|PWY-6549|PWY-5690}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:07, 9 January 2019
Contents
Reaction ISOCITRATE-DEHYDROGENASE-NAD+-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Isocitrate dehydrogenase, NAD-dependent
- isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial precursor
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 NAD[c] + 1 THREO-DS-ISO-CITRATE[c] => 1 2-KETOGLUTARATE[c] + 1 NADH[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 NAD+[c] + 1 D-threo-isocitrate[c] => 1 2-oxoglutarate[c] + 1 NADH[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008852001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00008852001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009162001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00009293001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009293001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00009162001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
- PWY66-398, TCA cycle III (animals): PWY66-398
- 11 reactions found over 11 reactions in the full pathway
- PWY-6549, L-glutamine biosynthesis III: PWY-6549
- 9 reactions found over 9 reactions in the full pathway
- PWY-5690, TCA cycle II (plants and fungi): PWY-5690
- 9 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
