Difference between revisions of "UDPGLUCEPIM-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLUCEPIM-RXN UDPGLUCEPIM-RXN] == * direction: ** REVERSIBLE * common name: ** UDP-glucose 4-epim...") |
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** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
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* [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328] | * [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328] | ||
** '''4''' reactions found over '''10''' reactions in the full pathway | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397] | ||
+ | ** '''1''' reactions found over '''17''' reactions in the full pathway | ||
* [[COLANSYN-PWY]], colanic acid building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=COLANSYN-PWY COLANSYN-PWY] | * [[COLANSYN-PWY]], colanic acid building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=COLANSYN-PWY COLANSYN-PWY] | ||
** '''5''' reactions found over '''11''' reactions in the full pathway | ** '''5''' reactions found over '''11''' reactions in the full pathway | ||
* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] | * [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527] | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317] | ||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
* [[PWY-7344]], UDP-D-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7344 PWY-7344] | * [[PWY-7344]], UDP-D-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7344 PWY-7344] | ||
** '''1''' reactions found over '''1''' reactions in the full pathway | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
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*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22168 22168] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22168 22168] | ||
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* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P35673 P35673] | ** [http://www.uniprot.org/uniprot/P35673 P35673] | ||
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** [http://www.uniprot.org/uniprot/P13226 P13226] | ** [http://www.uniprot.org/uniprot/P13226 P13226] | ||
** [http://www.uniprot.org/uniprot/P09609 P09609] | ** [http://www.uniprot.org/uniprot/P09609 P09609] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00291 R00291] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
{{#set: common name=UDP-glucose 4-epimerase}} | {{#set: common name=UDP-glucose 4-epimerase}} | ||
{{#set: ec number=EC-5.1.3.2}} | {{#set: ec number=EC-5.1.3.2}} | ||
{{#set: gene associated=CHC_T00007304001_1|CHC_T00006828001_1|CHC_T00009498001|CHC_T00009498001_1|CHC_T00006831001_1}} | {{#set: gene associated=CHC_T00007304001_1|CHC_T00006828001_1|CHC_T00009498001|CHC_T00009498001_1|CHC_T00006831001_1}} | ||
− | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-7328|PWY-6397|COLANSYN-PWY|PWY66-422|PWY-6527|PWY-6317|PWY-7344|PWY-3821}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 15:10, 9 January 2019
Contents
Reaction UDPGLUCEPIM-RXN
- direction:
- REVERSIBLE
- common name:
- UDP-glucose 4-epimerase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 UDP-α-D-glucose[c] <=> 1 UDP-α-D-galactose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00007304001_1
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00006828001_1
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00009498001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009498001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00006831001_1
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-7328, superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: PWY-7328
- 4 reactions found over 10 reactions in the full pathway
- PWY-6397, mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: PWY-6397
- 1 reactions found over 17 reactions in the full pathway
- COLANSYN-PWY, colanic acid building blocks biosynthesis: COLANSYN-PWY
- 5 reactions found over 11 reactions in the full pathway
- PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
- 5 reactions found over 5 reactions in the full pathway
- PWY-6527, stachyose degradation: PWY-6527
- 7 reactions found over 7 reactions in the full pathway
- PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
- 5 reactions found over 5 reactions in the full pathway
- PWY-7344, UDP-D-galactose biosynthesis: PWY-7344
- 1 reactions found over 1 reactions in the full pathway
- PWY-3821, D-galactose degradation III: PWY-3821
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN: