Difference between revisions of "CALVIN-PWY"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TA...") |
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[[Category:Pathway]] | [[Category:Pathway]] | ||
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] == | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] == | ||
| + | * common name: | ||
| + | ** Calvin-Benson-Bassham cycle | ||
* taxonomic range: | * taxonomic range: | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117] | ||
| Line 21: | Line 23: | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090] | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
** photosynthetic dark reactions | ** photosynthetic dark reactions | ||
| Line 43: | Line 43: | ||
*** [[CHC_T00005040001_1]] | *** [[CHC_T00005040001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[2TRANSKETO-RXN]] | * [[2TRANSKETO-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 51: | Line 51: | ||
*** [[CHC_T00009390001_1]] | *** [[CHC_T00009390001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[F16ALDOLASE-RXN]] | * [[F16ALDOLASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 59: | Line 59: | ||
*** [[CHC_T00008586001_1]] | *** [[CHC_T00008586001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[F16BDEPHOS-RXN]] | * [[F16BDEPHOS-RXN]] | ||
** 6 associated gene(s): | ** 6 associated gene(s): | ||
| Line 71: | Line 71: | ||
*** [[CHC_T00008537001_1]] | *** [[CHC_T00008537001_1]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[PHOSGLYPHOS-RXN]] | * [[PHOSGLYPHOS-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 81: | Line 81: | ||
*** [[CHC_T00009179001_1]] | *** [[CHC_T00009179001_1]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[PHOSPHORIBULOKINASE-RXN]] | * [[PHOSPHORIBULOKINASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 90: | Line 90: | ||
*** [[CHC_T00008651001]] | *** [[CHC_T00008651001]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[RIB5PISOM-RXN]] | * [[RIB5PISOM-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[CHC_T00009264001_1]] | *** [[CHC_T00009264001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]] | * [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 107: | Line 107: | ||
*** [[CHC_T00006620001_1]] | *** [[CHC_T00006620001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[RIBULP3EPIM-RXN]] | * [[RIBULP3EPIM-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| − | |||
*** [[CHC_T00008270001_1]] | *** [[CHC_T00008270001_1]] | ||
*** [[CHC_T00006121001_1]] | *** [[CHC_T00006121001_1]] | ||
| + | *** [[CHC_T00008270001]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[SEDOBISALDOL-RXN]] | * [[SEDOBISALDOL-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
| Line 133: | Line 133: | ||
*** [[CHC_T00008369001_1]] | *** [[CHC_T00008369001_1]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[TRIOSEPISOMERIZATION-RXN]] | * [[TRIOSEPISOMERIZATION-RXN]] | ||
** 5 associated gene(s): | ** 5 associated gene(s): | ||
| Line 145: | Line 145: | ||
*** [[CHC_T00009545001_1]] | *** [[CHC_T00009545001_1]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
== Reaction(s) not found == | == Reaction(s) not found == | ||
== External links == | == External links == | ||
| Line 154: | Line 154: | ||
* ARACYC: | * ARACYC: | ||
** [http://metacyc.org/ARA/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] | ** [http://metacyc.org/ARA/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] | ||
| + | {{#set: common name=Calvin-Benson-Bassham cycle}} | ||
{{#set: taxonomic range=TAX-1117}} | {{#set: taxonomic range=TAX-1117}} | ||
{{#set: taxonomic range=TAX-39119}} | {{#set: taxonomic range=TAX-39119}} | ||
| Line 173: | Line 174: | ||
{{#set: taxonomic range=TAX-2}} | {{#set: taxonomic range=TAX-2}} | ||
{{#set: taxonomic range=TAX-33090}} | {{#set: taxonomic range=TAX-33090}} | ||
| − | |||
{{#set: common name=photosynthetic dark reactions|photosynthetic CO2 fixation|reductive pentose phosphate pathway|Calvin cycle|carbon fixation|Calvin-Benson cycle}} | {{#set: common name=photosynthetic dark reactions|photosynthetic CO2 fixation|reductive pentose phosphate pathway|Calvin cycle|carbon fixation|Calvin-Benson cycle}} | ||
{{#set: reaction found=13}} | {{#set: reaction found=13}} | ||
{{#set: total reaction=13}} | {{#set: total reaction=13}} | ||
{{#set: completion rate=100.0}} | {{#set: completion rate=100.0}} | ||
Latest revision as of 16:32, 9 January 2019
Pathway CALVIN-PWY
- common name:
- Calvin-Benson-Bassham cycle
- taxonomic range:
- Synonym(s):
- photosynthetic dark reactions
- photosynthetic CO2 fixation
- reductive pentose phosphate pathway
- Calvin cycle
- carbon fixation
- Calvin-Benson cycle
Reaction(s) found
13 reactions found over 13 reactions in the full pathway
- 1.2.1.13-RXN
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
- 1TRANSKETO-RXN
- 2 associated gene(s):
- 3 reconstruction source(s) associated:
- 2TRANSKETO-RXN
- 2 associated gene(s):
- 3 reconstruction source(s) associated:
- F16ALDOLASE-RXN
- 2 associated gene(s):
- 3 reconstruction source(s) associated:
- F16BDEPHOS-RXN
- 6 associated gene(s):
- 4 reconstruction source(s) associated:
- PHOSGLYPHOS-RXN
- 3 associated gene(s):
- 4 reconstruction source(s) associated:
- PHOSPHORIBULOKINASE-RXN
- 2 associated gene(s):
- 4 reconstruction source(s) associated:
- RIB5PISOM-RXN
- 1 associated gene(s):
- 3 reconstruction source(s) associated:
- RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- RIBULP3EPIM-RXN
- 3 associated gene(s):
- 4 reconstruction source(s) associated:
- SEDOBISALDOL-RXN
- 1 associated gene(s):
- 2 reconstruction source(s) associated:
- SEDOHEPTULOSE-BISPHOSPHATASE-RXN
- 4 associated gene(s):
- 4 reconstruction source(s) associated:
- TRIOSEPISOMERIZATION-RXN
- 5 associated gene(s):
- 4 reconstruction source(s) associated:
Reaction(s) not found
External links
- PLANTCYC : CALVIN-PWY
- ARACYC:
