Difference between revisions of "1.10.2.2-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.10.2.2-RXN 1.10.2.2-RXN] == * direction: ** REVERSIBLE * common name: ** Ubiquinol-cytochrome c r...")
 
Line 11: Line 11:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Ubiquinols]][c] '''+''' 2 [[Cytochromes-C-Oxidized]][e] '''<=>''' 1 [[Ubiquinones]][c] '''+''' 2 [[Cytochromes-C-Reduced]][e] '''+''' 2 [[PROTON]][e]
+
** 2 [[Cytochromes-C-Oxidized]][e] '''+''' 1 [[Ubiquinols]][c] '''<=>''' 2 [[Cytochromes-C-Reduced]][e] '''+''' 2 [[PROTON]][e] '''+''' 1 [[Ubiquinones]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an ubiquinol[c] '''+''' 2 an oxidized c-type cytochrome[e] '''<=>''' 1 a ubiquinone[c] '''+''' 2 a reduced c-type cytochrome[e] '''+''' 2 H+[e]
+
** 2 an oxidized c-type cytochrome[e] '''+''' 1 an ubiquinol[c] '''<=>''' 2 a reduced c-type cytochrome[e] '''+''' 2 H+[e] '''+''' 1 a ubiquinone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[CHC_T00008759001]]
 
−
** Source: [[annotation-original_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
 
* Gene: [[CHC_T00009218001_1]]
 
* Gene: [[CHC_T00009218001_1]]
 
** Source: [[orthology-galdieria.sulphuraria]]
 
** Source: [[orthology-galdieria.sulphuraria]]
Line 28: Line 25:
 
** Source: [[orthology-galdieria.sulphuraria]]
 
** Source: [[orthology-galdieria.sulphuraria]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008759001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7082]], ammonia oxidation IV (autotrophic ammonia oxidizers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7082 PWY-7082]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
* [[PWY-3781]], aerobic respiration I (cytochrome c): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3781 PWY-3781]
 
* [[PWY-3781]], aerobic respiration I (cytochrome c): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3781 PWY-3781]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7082]], ammonia oxidation IV (autotrophic ammonia oxidizers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7082 PWY-7082]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-galdieria.sulphuraria]]
 
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 408: Line 408:
 
{{#set: common name=Ubiquinol-cytochrome c reductase iron-sulfur subunit}}
 
{{#set: common name=Ubiquinol-cytochrome c reductase iron-sulfur subunit}}
 
{{#set: ec number=EC-1.10.2.2}}
 
{{#set: ec number=EC-1.10.2.2}}
−
{{#set: gene associated=CHC_T00008759001|CHC_T00009218001_1|CHC_T00007973001_1|CHC_T00008759001_1}}
+
{{#set: gene associated=CHC_T00009218001_1|CHC_T00007973001_1|CHC_T00008759001_1|CHC_T00008759001}}
−
{{#set: in pathway=PWY-7082|PWY-3781|PWY-7279}}
+
{{#set: in pathway=PWY-3781|PWY-7279|PWY-7082}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:52, 9 January 2019

Reaction 1.10.2.2-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Ubiquinol-cytochrome c reductase iron-sulfur subunit
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3781, aerobic respiration I (cytochrome c): PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7279, aerobic respiration II (cytochrome c) (yeast): PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7082, ammonia oxidation IV (autotrophic ammonia oxidizers): PWY-7082
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=1.10.2.2-RXN&oldid=20931"