Difference between revisions of "DTDPGLUCDEHYDRAT-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCDEHYDRAT-RXN DTDPGLUCDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dTDP-...") |
|||
| Line 31: | Line 31: | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-3221]], dTDP-L-rhamnose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221] |
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY] | ||
** '''1''' reactions found over '''4''' reactions in the full pathway | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| − | |||
| − | |||
| − | |||
| − | |||
* [[PWY-7312]], dTDP-D-β-fucofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312] | * [[PWY-7312]], dTDP-D-β-fucofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312] | ||
** '''1''' reactions found over '''4''' reactions in the full pathway | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-7104]], dTDP-L-megosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7104 PWY-7104] | ||
| + | ** '''1''' reactions found over '''8''' reactions in the full pathway | ||
* [[PWY-7657]], dTDP-β-L-digitoxose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657] | * [[PWY-7657]], dTDP-β-L-digitoxose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657] | ||
** '''1''' reactions found over '''7''' reactions in the full pathway | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[PWY-7301]], dTDP-4-O-demethyl-β-L-noviose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7301 PWY-7301] |
** '''1''' reactions found over '''5''' reactions in the full pathway | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7814]], dTDP-L-daunosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7814 PWY-7814] | ||
| + | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
* [[PWY-7318]], dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7318 PWY-7318] | * [[PWY-7318]], dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7318 PWY-7318] | ||
** '''1''' reactions found over '''5''' reactions in the full pathway | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-6976]], dTDP-L-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6976 PWY-6976] | ||
| + | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
* [[PWY-6942]], dTDP-D-desosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6942 PWY-6942] | * [[PWY-6942]], dTDP-D-desosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6942 PWY-6942] | ||
** '''1''' reactions found over '''6''' reactions in the full pathway | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
* [[PWY-6808]], dTDP-D-forosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808] | * [[PWY-6808]], dTDP-D-forosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808] | ||
** '''1''' reactions found over '''9''' reactions in the full pathway | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7316]], dTDP-N-acetylviosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7316 PWY-7316] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6973]], dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6973 PWY-6973] | ||
| + | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7315]], dTDP-N-acetylthomosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7315 PWY-7315] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6953]], dTDP-3-acetamido-α-D-fucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6953 PWY-6953] | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7440]], dTDP-β-L-4-epi-vancosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440] | ||
| + | ** '''1''' reactions found over '''8''' reactions in the full pathway | ||
* [[PWY-7413]], dTDP-6-deoxy-α-D-allose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7413 PWY-7413] | * [[PWY-7413]], dTDP-6-deoxy-α-D-allose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7413 PWY-7413] | ||
** '''1''' reactions found over '''4''' reactions in the full pathway | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| − | |||
| − | |||
| − | |||
| − | |||
* [[PWY-6974]], dTDP-L-olivose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6974 PWY-6974] | * [[PWY-6974]], dTDP-L-olivose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6974 PWY-6974] | ||
** '''1''' reactions found over '''7''' reactions in the full pathway | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
| − | |||
| − | |||
| − | |||
| − | |||
* [[PWY-7414]], dTDP-α-D-mycaminose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7414 PWY-7414] | * [[PWY-7414]], dTDP-α-D-mycaminose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7414 PWY-7414] | ||
** '''1''' reactions found over '''5''' reactions in the full pathway | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7688]], dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7688 PWY-7688] | ||
| + | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 85: | Line 85: | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17221 17221] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17221 17221] | ||
| − | |||
| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/Q9R5L1 Q9R5L1] | ** [http://www.uniprot.org/uniprot/Q9R5L1 Q9R5L1] | ||
| Line 109: | Line 107: | ||
** [http://www.uniprot.org/uniprot/Q9RR28 Q9RR28] | ** [http://www.uniprot.org/uniprot/Q9RR28 Q9RR28] | ||
** [http://www.uniprot.org/uniprot/Q9SMJ5 Q9SMJ5] | ** [http://www.uniprot.org/uniprot/Q9SMJ5 Q9SMJ5] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R06513 R06513] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=dTDP-glucose 4,6-dehydratase}} | {{#set: common name=dTDP-glucose 4,6-dehydratase}} | ||
{{#set: ec number=EC-4.2.1.46}} | {{#set: ec number=EC-4.2.1.46}} | ||
{{#set: gene associated=CHC_T00009237001_1|CHC_T00009237001|CHC_T00008950001_1|CHC_T00008912001_1}} | {{#set: gene associated=CHC_T00009237001_1|CHC_T00009237001|CHC_T00008950001_1|CHC_T00008912001_1}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-3221|DTDPRHAMSYN-PWY|PWY-7312|PWY-7104|PWY-7657|PWY-7301|PWY-7814|PWY-7318|PWY-6976|PWY-6942|PWY-6808|PWY-7316|PWY-6973|PWY-7315|PWY-6953|PWY-7440|PWY-7413|PWY-6974|PWY-7414|PWY-7688}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:07, 9 January 2019
Contents
Reaction DTDPGLUCDEHYDRAT-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- dTDP-glucose 4,6-dehydratase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 DTDP-D-GLUCOSE[c] => 1 WATER[c] + 1 DTDP-DEOH-DEOXY-GLUCOSE[c]
- With common name(s):
- 1 dTDP-α-D-glucose[c] => 1 H2O[c] + 1 dTDP-4-dehydro-6-deoxy-α-D-glucopyranose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009237001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009237001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008950001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008912001_1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
Pathways
- PWY-3221, dTDP-L-rhamnose biosynthesis II: PWY-3221
- 1 reactions found over 3 reactions in the full pathway
- DTDPRHAMSYN-PWY, dTDP-L-rhamnose biosynthesis I: DTDPRHAMSYN-PWY
- 1 reactions found over 4 reactions in the full pathway
- PWY-7312, dTDP-D-β-fucofuranose biosynthesis: PWY-7312
- 1 reactions found over 4 reactions in the full pathway
- PWY-7104, dTDP-L-megosamine biosynthesis: PWY-7104
- 1 reactions found over 8 reactions in the full pathway
- PWY-7657, dTDP-β-L-digitoxose biosynthesis: PWY-7657
- 1 reactions found over 7 reactions in the full pathway
- PWY-7301, dTDP-4-O-demethyl-β-L-noviose biosynthesis: PWY-7301
- 1 reactions found over 5 reactions in the full pathway
- PWY-7814, dTDP-L-daunosamine biosynthesis: PWY-7814
- 1 reactions found over 6 reactions in the full pathway
- PWY-7318, dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis: PWY-7318
- 1 reactions found over 5 reactions in the full pathway
- PWY-6976, dTDP-L-mycarose biosynthesis: PWY-6976
- 1 reactions found over 7 reactions in the full pathway
- PWY-6942, dTDP-D-desosamine biosynthesis: PWY-6942
- 1 reactions found over 6 reactions in the full pathway
- PWY-6808, dTDP-D-forosamine biosynthesis: PWY-6808
- 1 reactions found over 9 reactions in the full pathway
- PWY-7316, dTDP-N-acetylviosamine biosynthesis: PWY-7316
- 1 reactions found over 4 reactions in the full pathway
- PWY-6973, dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: PWY-6973
- 1 reactions found over 9 reactions in the full pathway
- PWY-7315, dTDP-N-acetylthomosamine biosynthesis: PWY-7315
- 1 reactions found over 4 reactions in the full pathway
- PWY-6953, dTDP-3-acetamido-α-D-fucose biosynthesis: PWY-6953
- 1 reactions found over 5 reactions in the full pathway
- PWY-7440, dTDP-β-L-4-epi-vancosamine biosynthesis: PWY-7440
- 1 reactions found over 8 reactions in the full pathway
- PWY-7413, dTDP-6-deoxy-α-D-allose biosynthesis: PWY-7413
- 1 reactions found over 4 reactions in the full pathway
- PWY-6974, dTDP-L-olivose biosynthesis: PWY-6974
- 1 reactions found over 7 reactions in the full pathway
- PWY-7414, dTDP-α-D-mycaminose biosynthesis: PWY-7414
- 1 reactions found over 5 reactions in the full pathway
- PWY-7688, dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: PWY-7688
- 1 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
