Difference between revisions of "2.8.1.6-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** biotin synthetase * ec...") |
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== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 40: | Line 40: | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22060 22060] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22060 22060] | ||
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| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7] | ** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7] | ||
| Line 61: | Line 59: | ||
** [http://www.uniprot.org/uniprot/P12996 P12996] | ** [http://www.uniprot.org/uniprot/P12996 P12996] | ||
** [http://www.uniprot.org/uniprot/O59778 O59778] | ** [http://www.uniprot.org/uniprot/O59778 O59778] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=biotin synthetase}} | {{#set: common name=biotin synthetase}} | ||
| Line 67: | Line 67: | ||
{{#set: in pathway=PWY0-1507|PWY-7380}} | {{#set: in pathway=PWY0-1507|PWY-7380}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 17:54, 9 January 2019
Contents
Reaction 2.8.1.6-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- biotin synthetase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 S-ADENOSYLMETHIONINE[c] + 1 DETHIOBIOTIN[c] + 1 Sulfurated-Sulfur-Acceptors[c] + 2 Reduced-2Fe-2S-Ferredoxins[c] => 2 Oxidized-2Fe-2S-Ferredoxins[c] + 1 BIOTIN[c] + 2 MET[c] + 1 Unsulfurated-Sulfur-Acceptors[c] + 2 CH33ADO[c]
- With common name(s):
- 2 S-adenosyl-L-methionine[c] + 1 dethiobiotin[c] + 1 a sulfurated [sulfur carrier][c] + 2 a reduced [2Fe-2S] ferredoxin[c] => 2 an oxidized [2Fe-2S] ferredoxin[c] + 1 biotin[c] + 2 L-methionine[c] + 1 an unsulfurated [sulfur carrier][c] + 2 5'-deoxyadenosine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009361001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009361001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
- PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
- 3 reactions found over 3 reactions in the full pathway
- PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II: PWY-7380
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
