Difference between revisions of "RXN-14971"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971] == * direction: ** LEFT-TO-RIGHT * common name: ** succinate dehydrogenase (Co...") |
|||
| Line 33: | Line 33: | ||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] | * [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] | ||
** '''9''' reactions found over '''9''' reactions in the full pathway | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] | ||
| + | ** '''8''' reactions found over '''11''' reactions in the full pathway | ||
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] | * [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] | ||
** '''9''' reactions found over '''10''' reactions in the full pathway | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] | ||
| + | ** '''9''' reactions found over '''19''' reactions in the full pathway | ||
| + | * [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969] | ||
| + | ** '''8''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561] | ||
| + | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 61: | Line 61: | ||
{{#set: ec number=EC-1.3.5.1}} | {{#set: ec number=EC-1.3.5.1}} | ||
{{#set: gene associated=CHC_T00006990001_1|CHC_T00008943001|CHC_T00001817001_1|CHC_T00008943001_1|CHC_T00007584001_1|CHC_T00007286001_1}} | {{#set: gene associated=CHC_T00006990001_1|CHC_T00008943001|CHC_T00001817001_1|CHC_T00008943001_1|CHC_T00007584001_1|CHC_T00007286001_1}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-5690|PWY-7254|P105-PWY|TCA|PWY-6728|PWY-6969|PWY-561}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 17:07, 9 January 2019
Contents
Reaction RXN-14971
- direction:
- LEFT-TO-RIGHT
- common name:
- succinate dehydrogenase (Complex II) flavoprotein subunit precursor
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ETR-Quinones[c] + 1 SUC[c] => 1 ETR-Quinols[c] + 1 FUM[c]
- With common name(s):
- 1 an electron-transfer quinone[c] + 1 succinate[c] => 1 an electron-transfer quinol[c] + 1 fumarate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00006990001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00008943001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00001817001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00008943001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00007584001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00007286001_1
- Source: orthology-galdieria.sulphuraria
Pathways
- PWY-5690, TCA cycle II (plants and fungi): PWY-5690
- 9 reactions found over 9 reactions in the full pathway
- PWY-7254, TCA cycle VII (acetate-producers): PWY-7254
- 7 reactions found over 9 reactions in the full pathway
- P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase): P105-PWY
- 8 reactions found over 11 reactions in the full pathway
- TCA, TCA cycle I (prokaryotic): TCA
- 9 reactions found over 10 reactions in the full pathway
- PWY-6728, methylaspartate cycle: PWY-6728
- 9 reactions found over 19 reactions in the full pathway
- PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): PWY-6969
- 8 reactions found over 12 reactions in the full pathway
- PWY-561, superpathway of glyoxylate cycle and fatty acid degradation: PWY-561
- 5 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
