Difference between revisions of "DUTP-PYROP-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUTP-PYROP-RXN DUTP-PYROP-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...") |
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** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] | ||
| + | ** '''12''' reactions found over '''17''' reactions in the full pathway | ||
| + | * [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
* [[PWY-7206]], pyrimidine deoxyribonucleotides dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7206 PWY-7206] | * [[PWY-7206]], pyrimidine deoxyribonucleotides dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7206 PWY-7206] | ||
** '''2''' reactions found over '''3''' reactions in the full pathway | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| Line 29: | Line 33: | ||
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187] | * [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187] | ||
** '''4''' reactions found over '''7''' reactions in the full pathway | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
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== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
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*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10248 10248] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10248 10248] | ||
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* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/Q89932 Q89932] | ** [http://www.uniprot.org/uniprot/Q89932 Q89932] | ||
| Line 75: | Line 73: | ||
** [http://www.uniprot.org/uniprot/P28892 P28892] | ** [http://www.uniprot.org/uniprot/P28892 P28892] | ||
** [http://www.uniprot.org/uniprot/P28893 P28893] | ** [http://www.uniprot.org/uniprot/P28893 P28893] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02100 R02100] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: ec number=EC-3.6.1.23}} | {{#set: ec number=EC-3.6.1.23}} | ||
{{#set: ec number=EC-3.6.1.9}} | {{#set: ec number=EC-3.6.1.9}} | ||
{{#set: gene associated=CHC_T00009365001_1|CHC_T00002427001_1}} | {{#set: gene associated=CHC_T00009365001_1|CHC_T00002427001_1}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY0-166|PWY-6545|PWY-7206|PWY-7184|PWY-7187}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| − | {{#set: reconstruction source=orthology- | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 17:09, 9 January 2019
Contents
Reaction DUTP-PYROP-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 H2O[c] + 1 dUTP[c] => 1 H+[c] + 1 diphosphate[c] + 1 dUMP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009365001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00002427001_1
- Source: orthology-galdieria.sulphuraria
Pathways
- PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
- 12 reactions found over 17 reactions in the full pathway
- PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
- 8 reactions found over 9 reactions in the full pathway
- PWY-7206, pyrimidine deoxyribonucleotides dephosphorylation: PWY-7206
- 2 reactions found over 3 reactions in the full pathway
- PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II: PWY-7187
- 4 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
