Difference between revisions of "RXN-12263"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12263 RXN-12263] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
== Pathways == | == Pathways == | ||
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| − | |||
| − | |||
* [[PWY-6767]], 4,4'-diapolycopenedioate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6767 PWY-6767] | * [[PWY-6767]], 4,4'-diapolycopenedioate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6767 PWY-6767] | ||
** '''1''' reactions found over '''9''' reactions in the full pathway | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-6105]], botryococcenes and methylated squalene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6105 PWY-6105] | ||
| + | ** '''2''' reactions found over '''9''' reactions in the full pathway | ||
* [[PWY-5875]], staphyloxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5875 PWY-5875] | * [[PWY-5875]], staphyloxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5875 PWY-5875] | ||
** '''1''' reactions found over '''9''' reactions in the full pathway | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7072]], hopanoid biosynthesis (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7072 PWY-7072] | ||
| + | ** '''1''' reactions found over '''14''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
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*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
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{{#set: ec number=EC-2.5.1.103}} | {{#set: ec number=EC-2.5.1.103}} | ||
{{#set: gene associated=CHC_T00001581001_1}} | {{#set: gene associated=CHC_T00001581001_1}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-6767|PWY-6105|PWY-5875|PWY-7072}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| − | {{#set: reconstruction source=orthology- | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 17:09, 9 January 2019
Contents
Reaction RXN-12263
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 FARNESYL-PP[c] => 1 CPD-465[c] + 1 PPI[c]
- With common name(s):
- 2 (2E,6E)-farnesyl diphosphate[c] => 1 presqualene diphosphate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00001581001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
Pathways
- PWY-6767, 4,4'-diapolycopenedioate biosynthesis: PWY-6767
- 1 reactions found over 9 reactions in the full pathway
- PWY-6105, botryococcenes and methylated squalene biosynthesis: PWY-6105
- 2 reactions found over 9 reactions in the full pathway
- PWY-5875, staphyloxanthin biosynthesis: PWY-5875
- 1 reactions found over 9 reactions in the full pathway
- PWY-7072, hopanoid biosynthesis (bacteria): PWY-7072
- 1 reactions found over 14 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
External links
- LIGAND-RXN:
- UNIPROT:
