Difference between revisions of "PHENYLALANINE--TRNA-LIGASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...") |
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== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
* Gene: [[CHC_T00001598001_1]] | * Gene: [[CHC_T00001598001_1]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| Line 35: | Line 32: | ||
** Source: [[annotation-original_genome]] | ** Source: [[annotation-original_genome]] | ||
*** Assignment: AUTOMATED-NAME-MATCH | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[CHC_T00003422001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | ||
| Line 40: | Line 40: | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 50: | Line 50: | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19413 19413] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19413 19413] | ||
| − | |||
| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P94283 P94283] | ** [http://www.uniprot.org/uniprot/P94283 P94283] | ||
| Line 110: | Line 108: | ||
** [http://www.uniprot.org/uniprot/P08425 P08425] | ** [http://www.uniprot.org/uniprot/P08425 P08425] | ||
** [http://www.uniprot.org/uniprot/P15624 P15624] | ** [http://www.uniprot.org/uniprot/P15624 P15624] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R03660 R03660] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=phenylalanyl-tRNA synthetase alpha chain}} | {{#set: common name=phenylalanyl-tRNA synthetase alpha chain}} | ||
{{#set: common name=phenylalanine tRNA synthetase}} | {{#set: common name=phenylalanine tRNA synthetase}} | ||
{{#set: ec number=EC-6.1.1.20}} | {{#set: ec number=EC-6.1.1.20}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=CHC_T00001598001_1|CHC_T00002604001_1|CHC_270|CHC_T00009560001_1|CHC_T00009560001|CHC_T00003422001_1}} |
{{#set: in pathway=TRNA-CHARGING-PWY}} | {{#set: in pathway=TRNA-CHARGING-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 18:16, 9 January 2019
Contents
Reaction PHENYLALANINE--TRNA-LIGASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- phenylalanyl-tRNA synthetase alpha chain
- phenylalanine tRNA synthetase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 a tRNAphe[c] + 1 ATP[c] + 1 L-phenylalanine[c] => 1 an L-phenylalanyl-[tRNAphe][c] + 1 AMP[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00001598001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00002604001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_270
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009560001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009560001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00003422001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
Pathways
- TRNA-CHARGING-PWY, tRNA charging: TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- P94283
- Q9ZDB4
- Q9WZS9
- Q9PP34
- P56145
- O67620
- O73984
- Q9Z6R6
- Q58508
- P56146
- O27545
- O26837
- O58391
- O83938
- P47436
- O67087
- O83059
- O84843
- Q9UYX3
- Q9Z7W0
- Q9PJR8
- P47437
- Q9ZKF9
- Q9UYX2
- Q9ZKF8
- Q9JR76
- Q57911
- P43819
- P94282
- O84481
- Q9ZDB5
- Q9WZS8
- Q9RRX8
- Q9PP35
- P43820
- Q46107
- P15434
- Q5SGX1
- P37984
- P51346
- P75563
- P75564
- Q55187
- P95960
- P95961
- Q49032
- P08312
- P07395
- O42870
- O13432
- Q9GYS8
- O42849
- P17921
- P17922
- P15625
- P08425
- P15624
- LIGAND-RXN:
