Difference between revisions of "PORPHOBILSYNTH-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PORPHOBILSYNTH-RXN PORPHOBILSYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** delta-ami...") |
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** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188] | * [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188] | ||
** '''6''' reactions found over '''6''' reactions in the full pathway | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24064 24064] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24064 24064] | ||
| − | |||
| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P06214 P06214] | ** [http://www.uniprot.org/uniprot/P06214 P06214] | ||
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** [http://www.uniprot.org/uniprot/P43210 P43210] | ** [http://www.uniprot.org/uniprot/P43210 P43210] | ||
** [http://www.uniprot.org/uniprot/Q9ZNC9 Q9ZNC9] | ** [http://www.uniprot.org/uniprot/Q9ZNC9 Q9ZNC9] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00036 R00036] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=delta-aminolevulinic acid dehydratase (porphobilinogen synthase)}} | {{#set: common name=delta-aminolevulinic acid dehydratase (porphobilinogen synthase)}} | ||
{{#set: ec number=EC-4.2.1.24}} | {{#set: ec number=EC-4.2.1.24}} | ||
{{#set: gene associated=CHC_T00008491001|CHC_T00008491001_1}} | {{#set: gene associated=CHC_T00008491001|CHC_T00008491001_1}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-5188|PWY-5189}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 17:18, 9 January 2019
Contents
Reaction PORPHOBILSYNTH-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- delta-aminolevulinic acid dehydratase (porphobilinogen synthase)
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 5-AMINO-LEVULINATE[c] => 1 PORPHOBILINOGEN[c] + 2 WATER[c] + 1 PROTON[c]
- With common name(s):
- 2 5-aminolevulinate[c] => 1 porphobilinogen[c] + 2 H2O[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008491001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008491001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
Pathways
- PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
- 6 reactions found over 6 reactions in the full pathway
- PWY-5189, tetrapyrrole biosynthesis II (from glycine): PWY-5189
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
