Difference between revisions of "PHENYLALANINE-AMMONIA-LYASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-AMMONIA-LYASE-RXN PHENYLALANINE-AMMONIA-LYASE-RXN] == * direction: ** LEFT-TO-RIGHT *...") |
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== Genes associated with this reaction == | == Genes associated with this reaction == | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] |
| − | ** ''' | + | ** '''8''' reactions found over '''19''' reactions in the full pathway |
* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467] | * [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467] | ||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
* [[PWY-6444]], benzoate biosynthesis II (CoA-independent, non-β-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6444 PWY-6444] | * [[PWY-6444]], benzoate biosynthesis II (CoA-independent, non-β-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6444 PWY-6444] | ||
** '''4''' reactions found over '''4''' reactions in the full pathway | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| − | |||
| − | |||
* [[PWY-6457]], trans-cinnamoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6457 PWY-6457] | * [[PWY-6457]], trans-cinnamoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6457 PWY-6457] | ||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-5883]], ephedrine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5883 PWY-5883] | ||
| + | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[gap-filling]] | * Category: [[gap-filling]] | ||
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* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21384 21384] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21384 21384] | ||
| − | |||
| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P11544 P11544] | ** [http://www.uniprot.org/uniprot/P11544 P11544] | ||
| Line 76: | Line 74: | ||
** [http://www.uniprot.org/uniprot/O23865 O23865] | ** [http://www.uniprot.org/uniprot/O23865 O23865] | ||
** [http://www.uniprot.org/uniprot/P45724 P45724] | ** [http://www.uniprot.org/uniprot/P45724 P45724] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00697 R00697] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: ec number=EC-4.3.1.25}} | {{#set: ec number=EC-4.3.1.25}} | ||
{{#set: ec number=EC-4.3.1.24}} | {{#set: ec number=EC-4.3.1.24}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-1121|PWY1F-467|PWY-6444|PWY-6457|PWY-5883}} |
{{#set: reconstruction category=gap-filling}} | {{#set: reconstruction category=gap-filling}} | ||
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}} | {{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}} | ||
{{#set: reconstruction tool=meneco}} | {{#set: reconstruction tool=meneco}} | ||
{{#set: reconstruction comment=added for gapfilling}} | {{#set: reconstruction comment=added for gapfilling}} | ||
Latest revision as of 18:29, 9 January 2019
Contents
Reaction PHENYLALANINE-AMMONIA-LYASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 L-phenylalanine[c] => 1 ammonium[c] + 1 trans-cinnamate[c]
Genes associated with this reaction
Pathways
- PWY-1121, suberin monomers biosynthesis: PWY-1121
- 8 reactions found over 19 reactions in the full pathway
- PWY1F-467, phenylpropanoid biosynthesis, initial reactions: PWY1F-467
- 2 reactions found over 2 reactions in the full pathway
- PWY-6444, benzoate biosynthesis II (CoA-independent, non-β-oxidative): PWY-6444
- 4 reactions found over 4 reactions in the full pathway
- PWY-6457, trans-cinnamoyl-CoA biosynthesis: PWY-6457
- 2 reactions found over 2 reactions in the full pathway
- PWY-5883, ephedrine biosynthesis: PWY-5883
- 2 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: gap-filling
- Source: gap-filling-gapfilling_solution_with_meneco_draft_medium
- Tool: meneco
- Comment: added for gapfilling
- Tool: meneco
- Source: gap-filling-gapfilling_solution_with_meneco_draft_medium
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
