Difference between revisions of "ATP-CITRATE-PRO-S--LYASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATP-CITRATE-PRO-S--LYASE-RXN ATP-CITRATE-PRO-S--LYASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...") |
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*** Assignment: AUTOMATED-NAME-MATCH | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
− | |||
− | |||
* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] | * [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] | ||
** '''10''' reactions found over '''12''' reactions in the full pathway | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-5172]], acetyl-CoA biosynthesis III (from citrate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5172 PWY-5172] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
− | |||
− | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21160 21160] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21160 21160] | ||
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* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P16638 P16638] | ** [http://www.uniprot.org/uniprot/P16638 P16638] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00352 R00352] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=ATP citrate lyase}} | {{#set: common name=ATP citrate lyase}} | ||
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{{#set: ec number=EC-2.3.3.8}} | {{#set: ec number=EC-2.3.3.8}} | ||
{{#set: gene associated=CHC_T00009158001|CHC_T00009045001_1|CHC_T00009158001_1|CHC_T00009045001}} | {{#set: gene associated=CHC_T00009158001|CHC_T00009045001_1|CHC_T00009158001_1|CHC_T00009045001}} | ||
− | {{#set: in pathway= | + | {{#set: in pathway=P23-PWY|PWY-5172}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 18:53, 9 January 2019
Contents
Reaction ATP-CITRATE-PRO-S--LYASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- ATP citrate lyase
- ATP-citrate lyase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CO-A[c] + 1 CIT[c] + 1 ATP[c] => 1 OXALACETIC_ACID[c] + 1 ADP[c] + 1 Pi[c] + 1 ACETYL-COA[c]
- With common name(s):
- 1 coenzyme A[c] + 1 citrate[c] + 1 ATP[c] => 1 oxaloacetate[c] + 1 ADP[c] + 1 phosphate[c] + 1 acetyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009158001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009045001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00009158001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00009045001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
- P23-PWY, reductive TCA cycle I: P23-PWY
- 10 reactions found over 12 reactions in the full pathway
- PWY-5172, acetyl-CoA biosynthesis III (from citrate): PWY-5172
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links