Difference between revisions of "CHC T00008303001"

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(Created page with "Category:Gene == Gene CHC_T00009076001 == * left end position: ** 8133 * transcription direction: ** POSITIVE * right end position: ** 9620 * centisome position: ** 3.4459...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=APIGNAR-RXN APIGNAR-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Naringenin chalcone iso...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00009076001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=APIGNAR-RXN APIGNAR-RXN] ==
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* left end position:
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* direction:
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** 8133
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Naringenin chalcone isomerase
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* right end position:
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* ec number:
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** 9620
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** [http://enzyme.expasy.org/EC/5.5.1.6 EC-5.5.1.6]
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* centisome position:
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** 3.4459968   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PROTEIN-KINASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[APIGENIN]][c] '''=>''' 1 [[NARINGENIN-CMPD]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 2',4,4',6'-tetrahydroxychalcone[c] '''=>''' 1 (2S)-naringenin[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008856001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=8133}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02446 R02446]
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{{#set: right end position=9620}}
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* UNIPROT:
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{{#set: centisome position=3.4459968    }}
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** [http://www.uniprot.org/uniprot/P11650 P11650]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P11651 P11651]
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** [http://www.uniprot.org/uniprot/P41088 P41088]
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** [http://www.uniprot.org/uniprot/P14298 P14298]
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** [http://www.uniprot.org/uniprot/Q42925 Q42925]
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** [http://www.uniprot.org/uniprot/Q42926 Q42926]
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** [http://www.uniprot.org/uniprot/Q08704 Q08704]
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** [http://www.uniprot.org/uniprot/P28012 P28012]
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** [http://www.uniprot.org/uniprot/P41089 P41089]
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** [http://www.uniprot.org/uniprot/O81980 O81980]
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** [http://www.uniprot.org/uniprot/O22604 O22604]
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** [http://www.uniprot.org/uniprot/O22651 O22651]
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** [http://www.uniprot.org/uniprot/Q43754 Q43754]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Naringenin chalcone isomerase}}
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{{#set: ec number=EC-5.5.1.6}}
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{{#set: gene associated=CHC_T00008856001_1}}
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{{#set: in pathway=PWY-7397|PWY1F-FLAVSYN|PWY-6787}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}

Revision as of 10:47, 18 January 2018

Reaction APIGNAR-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Naringenin chalcone isomerase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2',4,4',6'-tetrahydroxychalcone[c] => 1 (2S)-naringenin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7397, naringenin biosynthesis (engineered): PWY-7397
    • 3 reactions found over 4 reactions in the full pathway
  • PWY1F-FLAVSYN, flavonoid biosynthesis: PWY1F-FLAVSYN
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum): PWY-6787
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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