Difference between revisions of "CHC T00008484001 1"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3,4-saturated f...")
 
(Created page with "Category:Gene == Gene CHC_T00008274001 == * left end position: ** 306090 * transcription direction: ** POSITIVE * right end position: ** 306838 * centisome position: ** 89...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] ==
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== Gene CHC_T00008274001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 306090
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* common name:
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* transcription direction:
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** 2,3,4-saturated fatty acyl-CoA synthetase
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** POSITIVE
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** long-chain-fatty-acid-CoA ligase
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* right end position:
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* ec number:
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** 306838
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* centisome position:
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** 89.69513   
 
* Synonym(s):
 
* Synonym(s):
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** Acyl-activating enzyme
 
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** Fatty acid thiokinase (long-chain)
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GSHTRAN-RXN]]
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** 1 [[CPD66-39]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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** original_genome
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* With common name(s):
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***automated-name-match
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** 1 a 2,3,4-saturated fatty acid[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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* [[GST-RXN]]
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** original_genome
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-13673]]
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* [[CHC_T00008160001_1]]
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** original_genome
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** [[pantograph]]-[[galdieria.sulphuraria]]
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***automated-name-match
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* [[CHC_T00008811001_1]]
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* [[RXN-15680]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** original_genome
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* [[CHC_T00009428001]]
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***automated-name-match
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** ORIGINAL_GENOME
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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* [[PWY-7112]]
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* [[CHC_T00009428001_1]]
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* [[PWY-6842]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-4061]]
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* [[CHC_T00008500001_1]]
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* [[PWY-7533]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008811001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=306090}}
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** [http://www.uniprot.org/uniprot/P18163 P18163]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P39518 P39518]
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{{#set: right end position=306838}}
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** [http://www.uniprot.org/uniprot/O51162 O51162]
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{{#set: centisome position=89.69513    }}
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** [http://www.uniprot.org/uniprot/P39002 P39002]
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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** [http://www.uniprot.org/uniprot/Q10776 Q10776]
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** [http://www.uniprot.org/uniprot/O83181 O83181]
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** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
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** [http://www.uniprot.org/uniprot/P94547 P94547]
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** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
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** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
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** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
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** [http://www.uniprot.org/uniprot/P44446 P44446]
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** [http://www.uniprot.org/uniprot/O30039 O30039]
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** [http://www.uniprot.org/uniprot/O51539 O51539]
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** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
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** [http://www.uniprot.org/uniprot/P33121 P33121]
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** [http://www.uniprot.org/uniprot/P33124 P33124]
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** [http://www.uniprot.org/uniprot/P30624 P30624]
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** [http://www.uniprot.org/uniprot/Q02602 Q02602]
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** [http://www.uniprot.org/uniprot/P69451 P69451]
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** [http://www.uniprot.org/uniprot/P69452 P69452]
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** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
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** [http://www.uniprot.org/uniprot/P47912 P47912]
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** [http://www.uniprot.org/uniprot/P73004 P73004]
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** [http://www.uniprot.org/uniprot/O81614 O81614]
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** [http://www.uniprot.org/uniprot/O15840 O15840]
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** [http://www.uniprot.org/uniprot/Q96537 Q96537]
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** [http://www.uniprot.org/uniprot/Q96538 Q96538]
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** [http://www.uniprot.org/uniprot/Q96338 Q96338]
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** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
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** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
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** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
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** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
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** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
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** [http://www.uniprot.org/uniprot/O60135 O60135]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2,3,4-saturated fatty acyl-CoA synthetase}}
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
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{{#set: gene associated=CHC_T00008160001_1|CHC_T00008811001_1|CHC_T00009428001|CHC_T00009428001_1|CHC_T00008500001_1|CHC_T00008811001}}
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{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 10:54, 18 January 2018

Gene CHC_T00008274001

  • left end position:
    • 306090
  • transcription direction:
    • POSITIVE
  • right end position:
    • 306838
  • centisome position:
    • 89.69513
  • Synonym(s):

Reactions associated

  • GSHTRAN-RXN
    • original_genome
      • automated-name-match
  • GST-RXN
    • original_genome
      • automated-name-match
  • RXN-13673
    • original_genome
      • automated-name-match
  • RXN-15680
    • original_genome
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008484001_1&oldid=5407"