Difference between revisions of "CPD-12906"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1439 RXN1G-1439] == * direction: ** LEFT-TO-RIGHT * common name: ** Trehalose 6-phosphate syn...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUDP DUDP] == * smiles: ** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2)) * i...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1439 RXN1G-1439] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUDP DUDP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
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* inchi key:
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** InChIKey=QHWZTVCCBMIIKE-SHYZEUOFSA-K
 
* common name:
 
* common name:
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** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
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** dUDP
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
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** 385.14   
 
* Synonym(s):
 
* Synonym(s):
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** 2'-deoxyuridine-5'-diphosphate
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** deoxyuridine-diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-14220]]
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** 1 [[CPD1G-774]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD1G-1354]][c]
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* [[DUDPKIN-RXN]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 6-O-trans-keto-mycolyl-trehalose 6-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 trehalose-trans-keto-mono-mycolate[c]
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* [[RXN0-722]]
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* [[UDPREDUCT-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN-14219]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* [[CHC_T00009495001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00010201001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008273001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** '''29''' reactions found over '''182''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* BIGG : dudp
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{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
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* PUBCHEM:
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{{#set: ec number=EC-3.1.3.12}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25246037 25246037]
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{{#set: gene associated=CHC_T00009495001|CHC_T00010201001|CHC_T00008273001}}
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* HMDB : HMDB01000
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{{#set: in pathway=PWYG-321}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01346 C01346]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEBI:
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{{#set: reconstruction source=original_genome}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60471 60471]
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* METABOLIGHTS : MTBLC60471
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{{#set: smiles=C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))}}
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{{#set: inchi key=InChIKey=QHWZTVCCBMIIKE-SHYZEUOFSA-K}}
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{{#set: common name=dUDP}}
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{{#set: molecular weight=385.14    }}
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{{#set: common name=2'-deoxyuridine-5'-diphosphate|deoxyuridine-diphosphate}}
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{{#set: consumed by=RXN-14220|DUDPKIN-RXN}}
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{{#set: produced by=RXN0-722|UDPREDUCT-RXN|RXN-14219}}

Revision as of 12:00, 18 January 2018

Metabolite DUDP

  • smiles:
    • C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
  • inchi key:
    • InChIKey=QHWZTVCCBMIIKE-SHYZEUOFSA-K
  • common name:
    • dUDP
  • molecular weight:
    • 385.14
  • Synonym(s):
    • 2'-deoxyuridine-5'-diphosphate
    • deoxyuridine-diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • BIGG : dudp
  • PUBCHEM:
  • HMDB : HMDB01000
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC60471
"C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))" cannot be used as a page name in this wiki.




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