Difference between revisions of "CPD-5168"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-43 PWY-43] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7238 RXN0-7238] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-acid-CoA l...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-43 PWY-43] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7238 RXN0-7238] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* common name:
 
* common name:
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** putrescine biosynthesis II
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** long-chain-fatty-acid-CoA ligase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]]
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** 1 [[CPD-9247]][e] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][e] '''=>''' 1 [[CPD-18346]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''2''' reaction(s) not found
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** 1 cis-vaccenate[e] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 H+[e] '''=>''' 1 cis-vaccenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=ARGDECARBOX-RXN ARGDECARBOX-RXN]
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** [http://metacyc.org/META/NEW-IMAGE?object=AGMATINE-DEIMINASE-RXN AGMATINE-DEIMINASE-RXN]
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== Genes associated with this reaction ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008811001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008500001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008160001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008811001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00009428001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00009428001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-43 PWY-43]
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: taxonomic range=TAX-1239}}
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{{#set: gene associated=CHC_T00008811001|CHC_T00008500001_1|CHC_T00008160001_1|CHC_T00008811001_1|CHC_T00009428001|CHC_T00009428001_1}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: in pathway=}}
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{{#set: common name=putrescine biosynthesis II}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=1}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reaction not found=2}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}

Revision as of 12:00, 18 January 2018

Reaction RXN0-7238

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long-chain-fatty-acid-CoA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 cis-vaccenate[e] + 1 coenzyme A[c] + 1 ATP[c] + 1 H+[e] => 1 cis-vaccenoyl-CoA[c] + 1 H+[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CPD-5168&oldid=5882"