Difference between revisions of "CHC 1140"

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(Created page with "Category:Gene == Gene CHC_T00008491001 == * left end position: ** 119435 * transcription direction: ** POSITIVE * right end position: ** 120643 * centisome position: ** 59...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] == * direction: ** R...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008491001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] ==
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* left end position:
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* direction:
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** 119435
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** REVERSIBLE
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/2.3.3.10 EC-2.3.3.10]
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* right end position:
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** 120643
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* centisome position:
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** 59.780865   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PORPHOBILSYNTH-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 acetoacetyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''+''' 1 H2O[c] '''<=>''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''+''' 1 coenzyme A[c] '''+''' 1 H+[c]
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* [[PWY-5189]]
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* [[PWY-5188]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008149001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** [[pantograph]]-[[a.taliana]]
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== Pathways ==
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* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
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** '''5''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=119435}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10188 10188]
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{{#set: right end position=120643}}
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* LIGAND-RXN:
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{{#set: centisome position=59.780865    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
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{{#set: reaction associated=PORPHOBILSYNTH-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-5189|PWY-5188}}
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** [http://www.uniprot.org/uniprot/P13704 P13704]
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** [http://www.uniprot.org/uniprot/P22791 P22791]
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** [http://www.uniprot.org/uniprot/P54870 P54870]
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** [http://www.uniprot.org/uniprot/P54869 P54869]
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** [http://www.uniprot.org/uniprot/O51626 O51626]
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** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
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** [http://www.uniprot.org/uniprot/P17425 P17425]
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** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
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** [http://www.uniprot.org/uniprot/Q01581 Q01581]
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** [http://www.uniprot.org/uniprot/P54961 P54961]
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** [http://www.uniprot.org/uniprot/P54839 P54839]
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** [http://www.uniprot.org/uniprot/P54874 P54874]
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** [http://www.uniprot.org/uniprot/P54868 P54868]
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** [http://www.uniprot.org/uniprot/P54873 P54873]
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** [http://www.uniprot.org/uniprot/P93773 P93773]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.3.3.10}}
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{{#set: gene associated=CHC_T00008149001_1}}
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{{#set: in pathway=PWY66-367|PWY-6174|PWY-922|PWY-7391|PWY-7571|PWY-7524}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}

Revision as of 11:02, 18 January 2018

Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-367, ketogenesis: PWY66-367
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6174, mevalonate pathway II (archaea): PWY-6174
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-922, mevalonate pathway I: PWY-922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7571, ferrichrome A biosynthesis: PWY-7571
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7524, mevalonate pathway III (archaea): PWY-7524
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_1140&oldid=6045"