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| − | [[Category:Reaction]] | + | [[Category:Pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOKIN-RXN GALACTOKIN-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5942 PWY-5942] == |
| − | * direction: | + | * taxonomic range: |
| − | ** REVERSIBLE | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751] |
| − | * ec number: | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157] |
| − | ** [http://enzyme.expasy.org/EC/2.7.1.6 EC-2.7.1.6] | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] |
| | + | * common name: |
| | + | ** trans-lycopene biosynthesis I (bacteria) |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) found == |
| − | * With identifiers: | + | * '''2''' reaction(s) found |
| − | ** 1 [[ATP]][c] '''+''' 1 [[ALPHA-D-GALACTOSE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GALACTOSE-1P]][c]
| + | ** [[PWY-6287]] |
| − | * With common name(s):
| + | ** [[RXNARA-8002]] |
| − | ** 1 ATP[c] '''+''' 1 α-D-galactose[c] '''<=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 α-D-galactose 1-phosphate[c] | + | == Reaction(s) not found == |
| − | | + | * '''1''' reaction(s) not found |
| − | == Genes associated with this reaction ==
| + | ** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12412 RXN-12412] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[CHC_T00006831001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]] | + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00006828001_1]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00007304001_1]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
| + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
| + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527] | + | |
| − | ** '''7''' reactions found over '''7''' reactions in the full pathway | + | |
| − | * [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
| + | |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[galdieria.sulphuraria]]
| + | |
| − | *** [[a.taliana]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[original_genome]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: taxonomic range=TAX-4751}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13553 13553]
| + | {{#set: taxonomic range=TAX-2157}} |
| − | * LIGAND-RXN:
| + | {{#set: taxonomic range=TAX-2}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
| + | {{#set: common name=trans-lycopene biosynthesis I (bacteria)}} |
| − | * UNIPROT:
| + | {{#set: reaction found=2}} |
| − | ** [http://www.uniprot.org/uniprot/P09608 P09608]
| + | {{#set: reaction not found=1}} |
| − | ** [http://www.uniprot.org/uniprot/Q01415 Q01415]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P22713 P22713]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P31767 P31767]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P96993 P96993]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P04385 P04385]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P13227 P13227]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P39574 P39574]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P13045 P13045]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
| + | |
| − | {{#set: direction=REVERSIBLE}} | + | |
| − | {{#set: ec number=EC-2.7.1.6}} | + | |
| − | {{#set: gene associated=CHC_T00006831001_1|CHC_T00006828001_1|CHC_T00007304001_1}} | + | |
| − | {{#set: in pathway=PWY-6317|PWY66-422|PWY-6527|PWY-3821}} | + | |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction tool=pantograph}} | + | |
| − | {{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=original_genome}}
| + | |
