Difference between revisions of "RXN-6501"

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(Created page with "Category:Gene == Gene CHC_255 == * left end position: ** 37082 * transcription direction: ** POSITIVE * right end position: ** 38335 * common name: ** hisS * centisome pos...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene CHC_255 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] ==
* left end position:
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* direction:
** 37082
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
* right end position:
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** 38335
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* common name:
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** hisS
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* centisome position:
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** 20.591272   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[HISTIDINE--TRNA-LIGASE-RXN]]
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* With identifiers:
** original_genome
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** 1 [[ALL-TRANS-HEXAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[3-HEXAPRENYL-4-HYDROXYBENZOATE]][c]
***automated-name-match
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* With common name(s):
== Pathways associated ==
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** 1 all-trans-hexaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-hexaprenyl-4-hydroxybenzoate[c]
* [[TRNA-CHARGING-PWY]]
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 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
 +
* [[CHC_T00004833001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00003042001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00007345001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00005639001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00002263001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
 +
== Pathways ==
 +
* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-19 PWY3O-19]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7235]], superpathway of ubiquinol-6 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7235 PWY-7235]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[galdieria.sulphuraria]]
 +
*** [[a.taliana]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=37082}}
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* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05616 R05616]
{{#set: right end position=38335}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=hisS}}
+
{{#set: ec number=EC-2.5.1.39}}
{{#set: centisome position=20.591272    }}
+
{{#set: gene associated=CHC_T00004833001_1|CHC_T00003042001_1|CHC_T00007345001_1|CHC_T00005639001_1|CHC_T00002263001_1}}
{{#set: reaction associated=HISTIDINE--TRNA-LIGASE-RXN}}
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{{#set: in pathway=PWY3O-19|PWY-7235}}
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}

Revision as of 11:14, 18 January 2018

Reaction RXN-9003

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY3O-19, ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): PWY3O-19
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7235, superpathway of ubiquinol-6 biosynthesis (eukaryotic): PWY-7235
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links