Difference between revisions of "PWY-6515"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
(Created page with "Category:Gene == Gene CHC_640 == * left end position: ** 90601 * transcription direction: ** NEGATIVE * right end position: ** 91077 * common name: ** accB * centisome pos...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] ==
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== Gene CHC_640 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 90601
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.170 EC-2.3.1.170]
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** NEGATIVE
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* right end position:
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** 91077
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* common name:
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** accB
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* centisome position:
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** 50.309856   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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** 3 [[MALONYL-COA]][c] '''+''' 4 [[PROTON]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-3041]][c] '''+''' 4 [[CO-A]][c] '''+''' 3 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADP]][c]
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** original_genome
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* With common name(s):
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***automated-name-match
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** 3 malonyl-CoA[c] '''+''' 4 H+[c] '''+''' 1 4-coumaroyl-CoA[c] '''+''' 1 NADPH[c] '''=>''' 1 H2O[c] '''+''' 1 isoliquiritigenin[c] '''+''' 4 coenzyme A[c] '''+''' 3 CO2[c] '''+''' 1 NADP+[c]
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== Pathways associated ==
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* [[PWY-7388]]
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== Genes associated with this reaction  ==
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* [[PWY-6722]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5743]]
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* [[CHC_T00008438001_1]]
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* [[PWY-5744]]
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** [[pantograph]]-[[a.taliana]]
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* [[PWY-5789]]
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* [[CHC_T00009478001_1]]
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* [[PWY-6679]]
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** [[pantograph]]-[[a.taliana]]
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* [[PWY-4381]]
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* [[CHC_T00009104001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=90601}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10584 10584]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=91077}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06568 R06568]
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{{#set: common name=accB}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07254 R07254]
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{{#set: centisome position=50.309856    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ACETYL-COA-CARBOXYLTRANSFER-RXN}}
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{{#set: ec number=EC-2.3.1.170}}
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{{#set: pathway associated=PWY-7388|PWY-6722|PWY-5743|PWY-5744|PWY-5789|PWY-6679|PWY-4381}}
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{{#set: gene associated=CHC_T00008438001_1|CHC_T00009478001_1|CHC_T00009104001_1}}
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{{#set: in pathway=PWY1F-FLAVSYN}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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Revision as of 12:21, 18 January 2018

Gene CHC_640

  • left end position:
    • 90601
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 91077
  • common name:
    • accB
  • centisome position:
    • 50.309856
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6515&oldid=7657"