Difference between revisions of "PWY-3081"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/6.1.1.17 EC-6.1.1.17]
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** UMP biosynthesis I
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* Synonym(s):
 
* Synonym(s):
−
** uridine-5'-phosphate biosynthesis I
 
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** de novo biosynthesis of uridine-5'-phosphate I
 
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** de novo biosynthesis of uridine-5'-monophosphate I
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''5''' reaction(s) found
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* With identifiers:
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** [[CARBPSYN-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[GLT-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLT-tRNAs]][c]
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** [[OROPRIBTRANS-RXN]]
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* With common name(s):
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** [[OROTPDECARB-RXN]]
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** 1 ATP[c] '''+''' 1 L-glutamate[c] '''+''' 1 a tRNAglu[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-glutamyl-[tRNAGlu][c]
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** [[ASPCARBTRANS-RXN]]
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−
** [[DIHYDROOROT-RXN]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* '''1''' reaction(s) not found
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* [[CHC_T00002361001_1]]
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** [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROTATE-DEHYDROGENASE-RXN DIHYDROOROTATE-DEHYDROGENASE-RXN]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008453001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
 +
== Pathways  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[galdieria.sulphuraria]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[original_genome]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5686 PWY-5686]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23540 23540]
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05578 R05578]
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{{#set: common name=UMP biosynthesis I}}
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* UNIPROT:
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{{#set: common name=uridine-5'-phosphate biosynthesis I|de novo biosynthesis of uridine-5'-phosphate I|de novo biosynthesis of uridine-5'-monophosphate I}}
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** [http://www.uniprot.org/uniprot/P47700 P47700]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/O52914 O52914]
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{{#set: reaction not found=1}}
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** [http://www.uniprot.org/uniprot/P43818 P43818]
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** [http://www.uniprot.org/uniprot/O26157 O26157]
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** [http://www.uniprot.org/uniprot/Q9ZLJ1 Q9ZLJ1]
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** [http://www.uniprot.org/uniprot/O25360 O25360]
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** [http://www.uniprot.org/uniprot/O51345 O51345]
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** [http://www.uniprot.org/uniprot/Q9Z7Z3 Q9Z7Z3]
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** [http://www.uniprot.org/uniprot/P96551 P96551]
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** [http://www.uniprot.org/uniprot/O67271 O67271]
 +
** [http://www.uniprot.org/uniprot/O83679 O83679]
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** [http://www.uniprot.org/uniprot/Q9ZLZ7 Q9ZLZ7]
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** [http://www.uniprot.org/uniprot/Q9PP78 Q9PP78]
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** [http://www.uniprot.org/uniprot/Q9CDZ7 Q9CDZ7]
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** [http://www.uniprot.org/uniprot/O84451 O84451]
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** [http://www.uniprot.org/uniprot/Q9X2I8 Q9X2I8]
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** [http://www.uniprot.org/uniprot/Q9JWT4 Q9JWT4]
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** [http://www.uniprot.org/uniprot/Q9ZDK3 Q9ZDK3]
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** [http://www.uniprot.org/uniprot/Q9X172 Q9X172]
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** [http://www.uniprot.org/uniprot/Q58772 Q58772]
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** [http://www.uniprot.org/uniprot/Q9ZCT8 Q9ZCT8]
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** [http://www.uniprot.org/uniprot/P59690 P59690]
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** [http://www.uniprot.org/uniprot/Q43768 Q43768]
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** [http://www.uniprot.org/uniprot/Q43794 Q43794]
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** [http://www.uniprot.org/uniprot/P46655 P46655]
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** [http://www.uniprot.org/uniprot/P48525 P48525]
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** [http://www.uniprot.org/uniprot/P75114 P75114]
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** [http://www.uniprot.org/uniprot/Q49061 Q49061]
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** [http://www.uniprot.org/uniprot/P22249 P22249]
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** [http://www.uniprot.org/uniprot/P22250 P22250]
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** [http://www.uniprot.org/uniprot/P04805 P04805]
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** [http://www.uniprot.org/uniprot/P07814 P07814]
 +
** [http://www.uniprot.org/uniprot/P15189 P15189]
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** [http://www.uniprot.org/uniprot/O65253 O65253]
 +
** [http://www.uniprot.org/uniprot/O68055 O68055]
 +
** [http://www.uniprot.org/uniprot/O68142 O68142]
 +
** [http://www.uniprot.org/uniprot/O86528 O86528]
 +
** [http://www.uniprot.org/uniprot/O13775 O13775]
 +
** [http://www.uniprot.org/uniprot/Q9ZFA3 Q9ZFA3]
 +
** [http://www.uniprot.org/uniprot/O82462 O82462]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-6.1.1.17}}
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{{#set: gene associated=CHC_T00002361001_1|CHC_T00008453001_1}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY|PWY-5188}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=galdieria.sulphuraria}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=original_genome}}

Revision as of 11:21, 18 January 2018

Reaction GLURS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-glutamate[c] + 1 a tRNAglu[c] => 1 diphosphate[c] + 1 AMP[c] + 1 an L-glutamyl-[tRNAGlu][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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