Difference between revisions of "Protein-With-N-Terminal-Met"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** aspartate aminotransferase **...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7526 CPD-7526] == * smiles: ** CC(=CCCC(=CCCC(C)=CC=CC(=CC=CC=C(C=CC=C(C)CCC=C(CCC=C(C)C)C)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7526 CPD-7526] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC(=CCCC(=CCCC(C)=CC=CC(=CC=CC=C(C=CC=C(C)CCC=C(CCC=C(C)C)C)C)C)C)C
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* inchi key:
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** InChIKey=BIWLELKAFXRPDE-ZURBLSRNSA-N
 
* common name:
 
* common name:
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** aspartate aminotransferase
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** 9,9'-di-cis-ζ-carotene
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** Aspartate aminotransferase
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* molecular weight:
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** probable aspartate aminotransferase
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** 540.914   
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** Aspartate transaminase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-11356]]
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** 1 [[L-CYSTEATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[CPD-380]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-11354]]
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** 1 L-cysteate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 3-sulfopyruvate[c]
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== Reaction(s) of unknown directionality ==
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* [[RXN-12242-CPD-7526/PLASTOQUINONE-9//CPD-7496/CPD-12829.45.]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00003344001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00006498001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008432001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00005085001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00010197001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00009477001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00009477001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00010017001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6440490 6440490]
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{{#set: direction=REVERSIBLE}}
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* CHEMSPIDER:
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{{#set: common name=aspartate aminotransferase}}
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** [http://www.chemspider.com/Chemical-Structure.4944750.html 4944750]
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{{#set: common name=Aspartate aminotransferase}}
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* CHEBI:
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{{#set: common name=probable aspartate aminotransferase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=48716 48716]
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{{#set: common name=Aspartate transaminase}}
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* LIGAND-CPD:
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{{#set: ec number=EC-2.6.1.1}}
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** [http://www.genome.jp/dbget-bin/www_bget?C15857 C15857]
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{{#set: gene associated=CHC_T00003344001_1|CHC_T00006498001_1|CHC_T00008432001|CHC_T00005085001_1|CHC_T00010197001|CHC_T00009477001|CHC_T00009477001_1|CHC_T00010017001}}
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* HMDB : HMDB03063
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{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
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{{#set: smiles=CC(=CCCC(=CCCC(C)=CC=CC(=CC=CC=C(C=CC=C(C)CCC=C(CCC=C(C)C)C)C)C)C)C}}
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{{#set: reconstruction category=orthology}}
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{{#set: inchi key=InChIKey=BIWLELKAFXRPDE-ZURBLSRNSA-N}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=9,9'-di-cis-&zeta;-carotene}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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{{#set: molecular weight=540.914    }}
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{{#set: reconstruction category=annotation}}
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{{#set: consumed by=RXN-11356}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: produced by=RXN-11354}}
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{{#set: reconstruction source=original_genome}}
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{{#set: consumed or produced by=RXN-12242-CPD-7526/PLASTOQUINONE-9//CPD-7496/CPD-12829.45.}}

Revision as of 11:23, 18 January 2018

Metabolite CPD-7526

  • smiles:
    • CC(=CCCC(=CCCC(C)=CC=CC(=CC=CC=C(C=CC=C(C)CCC=C(CCC=C(C)C)C)C)C)C)C
  • inchi key:
    • InChIKey=BIWLELKAFXRPDE-ZURBLSRNSA-N
  • common name:
    • 9,9'-di-cis-ζ-carotene
  • molecular weight:
    • 540.914
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




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