Difference between revisions of "METOH"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALISOM-RXN 3-ISOPROPYLMALISOM-RXN] == * direction: ** REVERSIBLE * common name: ** 3-is...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALISOM-RXN 3-ISOPROPYLMALISOM-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** 3-isopropylmalate dehydratase
+
** 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
−
** 3-isopropylmalate dehydratase small subunit
+
 
* Synonym(s):
 
* Synonym(s):
−
** (2R,3S)-3-isopropylmalate hydro-lyase
+
** HMP-PP biosynthesis
−
** β-isopropylmalate dehydratase
+
−
** α-isopropylmalate isomerase
+
−
** 3-isopropylmalate hydro-lyase
+
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
* '''1''' reaction(s) found
−
** 1 [[CPD-9451]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
+
** [[PYRIMSYN3-RXN]]
−
* With common name(s):
+
== Reaction(s) not found ==
−
** 1 2-isopropylmaleate[c] '''+''' 1 H2O[c] '''<=>''' 1 (2S)-2-isopropylmalate[c]
+
* '''1''' reaction(s) not found
−
 
+
** [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN1-RXN PYRIMSYN1-RXN]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[CHC_T00009184001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009087001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009087001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009184001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
*** [[a.taliana]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ECOCYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16293 16293]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6890 PWY-6890]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-4751}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03968 R03968]
+
{{#set: taxonomic range=TAX-33090}}
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-33630}}
−
** [http://www.uniprot.org/uniprot/Q9PLW1 Q9PLW1]
+
{{#set: taxonomic range=TAX-2157}}
−
** [http://www.uniprot.org/uniprot/Q9JU82 Q9JU82]
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.uniprot.org/uniprot/P80858 P80858]
+
{{#set: common name=4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis}}
−
** [http://www.uniprot.org/uniprot/Q9UZ07 Q9UZ07]
+
{{#set: common name=HMP-PP biosynthesis}}
−
** [http://www.uniprot.org/uniprot/Q9JU81 Q9JU81]
+
{{#set: reaction found=1}}
−
** [http://www.uniprot.org/uniprot/Q58673 Q58673]
+
{{#set: reaction not found=1}}
−
** [http://www.uniprot.org/uniprot/Q02144 Q02144]
+
−
** [http://www.uniprot.org/uniprot/P44968 P44968]
+
−
** [http://www.uniprot.org/uniprot/Q58667 Q58667]
+
−
** [http://www.uniprot.org/uniprot/P44438 P44438]
+
−
** [http://www.uniprot.org/uniprot/P0A6A6 P0A6A6]
+
−
** [http://www.uniprot.org/uniprot/Q9PLW2 Q9PLW2]
+
−
** [http://www.uniprot.org/uniprot/Q44022 Q44022]
+
−
** [http://www.uniprot.org/uniprot/Q44023 Q44023]
+
−
** [http://www.uniprot.org/uniprot/Q44427 Q44427]
+
−
** [http://www.uniprot.org/uniprot/P17279 P17279]
+
−
** [http://www.uniprot.org/uniprot/P04787 P04787]
+
−
** [http://www.uniprot.org/uniprot/P15717 P15717]
+
−
** [http://www.uniprot.org/uniprot/P18250 P18250]
+
−
** [http://www.uniprot.org/uniprot/Q02142 Q02142]
+
−
** [http://www.uniprot.org/uniprot/P30126 P30126]
+
−
** [http://www.uniprot.org/uniprot/P50181 P50181]
+
−
** [http://www.uniprot.org/uniprot/P07264 P07264]
+
−
** [http://www.uniprot.org/uniprot/P74207 P74207]
+
−
** [http://www.uniprot.org/uniprot/O86534 O86534]
+
−
** [http://www.uniprot.org/uniprot/O86535 O86535]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=3-isopropylmalate dehydratase}}
+
−
{{#set: common name=3-isopropylmalate dehydratase small subunit}}
+
−
{{#set: common name=(2R,3S)-3-isopropylmalate hydro-lyase|&beta;-isopropylmalate dehydratase|&alpha;-isopropylmalate isomerase|3-isopropylmalate hydro-lyase}}
+
−
{{#set: gene associated=CHC_T00009184001_1|CHC_T00009087001|CHC_T00009087001_1|CHC_T00009184001}}
+
−
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 12:23, 18 January 2018

Pathway PWY-6890

Reaction(s) found

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=METOH&oldid=7853"