Difference between revisions of "PWY-6733"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] == * direction: ** REVERSIBLE * common name: ** Glutamate dehydrogenas...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** (3R)-3-hydroxybutanoy...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glutamate dehydrogenase
+
** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
 +
** crotonoyl-[acyl-carrier-protein] hydratase
 +
** β-hydroxybutyryl acyl carrier protein (ACP) dehydrase
 +
** β-hydroxybutyryl acyl carrier protein dehydrase
 +
** enoyl acyl carrier protein hydrase
 +
** crotonyl acyl carrier protein hydratase
 +
** 3-hydroxybutyryl acyl carrier protein dehydratase
 +
** β-hydroxybutyryl acyl carrier  protein dehydrase
 +
** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
 +
** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLT]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[Beta-3-hydroxybutyryl-ACPs]][c] '''=>''' 1 [[Crotonyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-glutamate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c] '''<=>''' 1 NADPH[c] '''+''' 1 ammonium[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 H+[c]
+
** 1 a (3R)-3-hydroxybutanoyl-[acp][c] '''=>''' 1 a crotonyl-[acp][c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00010235001]]
+
* [[CHC_T00009190001_1]]
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00010235001_1]]
+
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''22''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
+
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[galdieria.sulphuraria]]
 
*** [[galdieria.sulphuraria]]
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[original_genome]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11612 11612]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04428 R04428]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P07262 P07262]
+
{{#set: common name=(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase}}
−
** [http://www.uniprot.org/uniprot/P15111 P15111]
+
{{#set: ec number=EC-2.3.1.86}}
−
** [http://www.uniprot.org/uniprot/P28724 P28724]
+
{{#set: ec number=EC-2.3.1.85}}
−
** [http://www.uniprot.org/uniprot/P43793 P43793]
+
{{#set: ec number=EC-4.2.1.59}}
−
** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
+
{{#set: common name=crotonoyl-[acyl-carrier-protein] hydratase|&beta;-hydroxybutyryl acyl carrier protein (ACP) dehydrase|&beta;-hydroxybutyryl acyl carrier protein dehydrase|enoyl acyl carrier protein hydrase|crotonyl acyl carrier protein hydratase|3-hydroxybutyryl acyl carrier protein dehydratase|&beta;-hydroxybutyryl acyl carrier  protein dehydrase|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase}}
−
** [http://www.uniprot.org/uniprot/P00370 P00370]
+
{{#set: gene associated=CHC_T00009190001_1}}
−
** [http://www.uniprot.org/uniprot/P00369 P00369]
+
{{#set: in pathway=PWY-5971|PWY-5994|PWY-7388}}
−
** [http://www.uniprot.org/uniprot/P29507 P29507]
+
−
** [http://www.uniprot.org/uniprot/P28998 P28998]
+
−
** [http://www.uniprot.org/uniprot/P29051 P29051]
+
−
** [http://www.uniprot.org/uniprot/P31026 P31026]
+
−
** [http://www.uniprot.org/uniprot/P39475 P39475]
+
−
** [http://www.uniprot.org/uniprot/P39708 P39708]
+
−
** [http://www.uniprot.org/uniprot/P54387 P54387]
+
−
** [http://www.uniprot.org/uniprot/P54386 P54386]
+
−
** [http://www.uniprot.org/uniprot/P95544 P95544]
+
−
** [http://www.uniprot.org/uniprot/P78804 P78804]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Glutamate dehydrogenase}}
+
−
{{#set: ec number=EC-1.4.1.4}}
+
−
{{#set: gene associated=CHC_T00010235001|CHC_T00010235001_1}}
+
−
{{#set: in pathway=GLUTSYNIII-PWY|PWY-5913|PWY-5675|PWY490-3}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=galdieria.sulphuraria}}
 
{{#set: reconstruction source=galdieria.sulphuraria}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Revision as of 12:24, 18 January 2018

Reaction 4.2.1.58-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
  • ec number:
  • Synonym(s):
    • crotonoyl-[acyl-carrier-protein] hydratase
    • β-hydroxybutyryl acyl carrier protein (ACP) dehydrase
    • β-hydroxybutyryl acyl carrier protein dehydrase
    • enoyl acyl carrier protein hydrase
    • crotonyl acyl carrier protein hydratase
    • 3-hydroxybutyryl acyl carrier protein dehydratase
    • β-hydroxybutyryl acyl carrier protein dehydrase
    • (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
    • (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 22 reactions found over 31 reactions in the full pathway
  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

"(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase" cannot be used as a page name in this wiki.


  • "crotonoyl-[acyl-carrier-protein] hydratase" cannot be used as a page name in this wiki.
  • "(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)" cannot be used as a page name in this wiki.
  • "(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase" cannot be used as a page name in this wiki.



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