Difference between revisions of "MET"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10806 CPD-10806] == * smiles: ** CCCCCC(O)[CH]=CC=O * inchi key: ** InChIKey=JVJFIQYAHPMBBX...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10806 CPD-10806] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CCCCCC(O)[CH]=CC=O
 +
* inchi key:
 +
** InChIKey=JVJFIQYAHPMBBX-FNORWQNLSA-N
 
* common name:
 
* common name:
−
** 2-isopropylmalate synthase
+
** 4-hydroxy-2-nonenal
−
* ec number:
+
* molecular weight:
−
** [http://enzyme.expasy.org/EC/2.3.3.13 EC-2.3.3.13]
+
** 156.224   
 
* Synonym(s):
 
* Synonym(s):
 +
** 4HNE
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-13673]]
−
** 1 [[WATER]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] '''+''' 1 [[PROTON]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 H2O[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 (2S)-2-isopropylmalate[c] '''+''' 1 H+[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[CHC_T00009551001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009551001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00008989001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008989001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
*** [[a.taliana]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21524 21524]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5283344 5283344]
−
* LIGAND-RXN:
+
* CHEMSPIDER:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01213 R01213]
+
** [http://www.chemspider.com/Chemical-Structure.4446465.html 4446465]
−
* UNIPROT:
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/P06208 P06208]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=32585 32585]
−
** [http://www.uniprot.org/uniprot/Q58595 Q58595]
+
* METABOLIGHTS : MTBLC32585
−
** [http://www.uniprot.org/uniprot/P09151 P09151]
+
* HMDB : HMDB04362
−
** [http://www.uniprot.org/uniprot/Q9PLV9 Q9PLV9]
+
{{#set: smiles=CCCCCC(O)[CH]=CC=O}}
−
** [http://www.uniprot.org/uniprot/Q9JUK6 Q9JUK6]
+
{{#set: inchi key=InChIKey=JVJFIQYAHPMBBX-FNORWQNLSA-N}}
−
** [http://www.uniprot.org/uniprot/Q58787 Q58787]
+
{{#set: common name=4-hydroxy-2-nonenal}}
−
** [http://www.uniprot.org/uniprot/P94565 P94565]
+
{{#set: molecular weight=156.224    }}
−
** [http://www.uniprot.org/uniprot/Q9JP75 Q9JP75]
+
{{#set: common name=4HNE}}
−
** [http://www.uniprot.org/uniprot/Q02141 Q02141]
+
{{#set: consumed by=RXN-13673}}
−
** [http://www.uniprot.org/uniprot/P48575 P48575]
+
−
** [http://www.uniprot.org/uniprot/O86511 O86511]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=2-isopropylmalate synthase}}
+
−
{{#set: ec number=EC-2.3.3.13}}
+
−
{{#set: gene associated=CHC_T00009551001|CHC_T00009551001_1|CHC_T00008989001_1|CHC_T00008989001}}
+
−
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 11:33, 18 January 2018

Metabolite CPD-10806

  • smiles:
    • CCCCCC(O)[CH]=CC=O
  • inchi key:
    • InChIKey=JVJFIQYAHPMBBX-FNORWQNLSA-N
  • common name:
    • 4-hydroxy-2-nonenal
  • molecular weight:
    • 156.224
  • Synonym(s):
    • 4HNE

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • PUBCHEM:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC32585
  • HMDB : HMDB04362
"CCCCCC(O)[CH]=CC=O" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=MET&oldid=8646"