Difference between revisions of "PWY-5054"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
 
(Created page with "Category:Gene == Gene CHC_T00008585001 == * left end position: ** 354824 * transcription direction: ** NEGATIVE * right end position: ** 359068 * centisome position: ** 97...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN] ==
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== Gene CHC_T00008585001 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 354824
* ec number:
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* transcription direction:
** [http://enzyme.expasy.org/EC/1.1.1.28 EC-1.1.1.28]
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** NEGATIVE
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* right end position:
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** 359068
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* centisome position:
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** 97.74092   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[FGAMSYN-RXN]]
** 1 [[NADH]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[D-LACTATE]][c]
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** original_genome
* With common name(s):
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***automated-name-match
** 1 NADH[c] '''+''' 1 pyruvate[c] '''+''' 1 H+[c] '''=>''' 1 NAD+[c] '''+''' 1 (R)-lactate[c]
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== Pathways associated ==
 
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* [[PWY-6121]]
== Genes associated with this reaction  ==
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* [[PWY-6122]]
Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6277]]
* [[CHC_T00003974001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways ==
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* [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901]
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** '''9''' reactions found over '''12''' reactions in the full pathway
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* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
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** '''11''' reactions found over '''16''' reactions in the full pathway
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* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate): [http://metacyc.org/META/NEW-IMAGE?object=ALACAT2-PWY ALACAT2-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6454]], vancomycin resistance I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6454 PWY-6454]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''15''' reactions found over '''18''' reactions in the full pathway
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* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
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** '''6''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: left end position=354824}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16369 16369]
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{{#set: transcription direction=NEGATIVE}}
* LIGAND-RXN:
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{{#set: right end position=359068}}
** [http://www.genome.jp/dbget-bin/www_bget?R00704 R00704]
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{{#set: centisome position=97.74092    }}
* UNIPROT:
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{{#set: reaction associated=FGAMSYN-RXN}}
** [http://www.uniprot.org/uniprot/P26297 P26297]
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{{#set: pathway associated=PWY-6121|PWY-6122|PWY-6277}}
** [http://www.uniprot.org/uniprot/P26298 P26298]
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** [http://www.uniprot.org/uniprot/Q7M4J0 Q7M4J0]
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** [http://www.uniprot.org/uniprot/Q9R553 Q9R553]
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** [http://www.uniprot.org/uniprot/P06149 P06149]
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** [http://www.uniprot.org/uniprot/Q9JT76 Q9JT76]
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** [http://www.uniprot.org/uniprot/Q9JUP8 Q9JUP8]
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** [http://www.uniprot.org/uniprot/P52643 P52643]
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** [http://www.uniprot.org/uniprot/P45295 P45295]
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** [http://www.uniprot.org/uniprot/P30901 P30901]
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** [http://www.uniprot.org/uniprot/Q89388 Q89388]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.1.1.28}}
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{{#set: gene associated=CHC_T00003974001_1}}
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{{#set: in pathway=PWY-6901|FERMENTATION-PWY|ALACAT2-PWY|PWY-6454|P122-PWY|PWY4LZ-257}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Revision as of 11:34, 18 January 2018

Gene CHC_T00008585001

  • left end position:
    • 354824
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 359068
  • centisome position:
    • 97.74092
  • Synonym(s):

Reactions associated

Pathways associated

External links