Difference between revisions of "RXN-12086"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Putativ...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14107 RXN-14107] == * direction: ** LEFT-TO-RIGHT * common name: ** menaquinol-cytochrome c red...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14107 RXN-14107] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Putative Acyl-COA dehydrogenase
+
** menaquinol-cytochrome c reductase
 +
** Ubiquinol-cytochrome c reductase iron-sulfur subunit
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
+
** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2]
 
* Synonym(s):
 
* Synonym(s):
−
** fatty acyl coenzyme A dehydrogenase
+
** menaquinone:cytochrome c reductase
−
** acyl coenzyme A dehydrogenase
+
−
** fatty-acyl-CoA dehydrogenase
+
−
** general acyl CoA dehydrogenase
+
−
** medium-chain acyl-coenzyme A dehydrogenase
+
−
** long-chain acyl coenzyme A dehydrogenase
+
−
** long-chain acyl-CoA dehydrogenase
+
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
+
** 2 [[Cytochromes-C-Oxidized]][e] '''+''' 1 [[Menaquinols]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[Cytochromes-C-Reduced]][e] '''+''' 1 [[Menaquinones]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''=>''' 1 a trans-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
** 2 an oxidized c-type cytochrome[e] '''+''' 1 a menaquinol[c] '''=>''' 2 H+[c] '''+''' 2 a reduced c-type cytochrome[e] '''+''' 1 a menaquinone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009166001_1]]
+
* [[CHC_T00008759001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00009166001]]
+
 
** ORIGINAL_GENOME
 
** ORIGINAL_GENOME
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
 +
* [[CHC_T00009218001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00007973001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00008759001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
Line 40: Line 37:
 
*** [[original_genome]]
 
*** [[original_genome]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P16219 P16219]
 
−
** [http://www.uniprot.org/uniprot/P45952 P45952]
 
−
** [http://www.uniprot.org/uniprot/P15651 P15651]
 
−
** [http://www.uniprot.org/uniprot/P11310 P11310]
 
−
** [http://www.uniprot.org/uniprot/P08503 P08503]
 
−
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
 
−
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
 
−
** [http://www.uniprot.org/uniprot/P45867 P45867]
 
−
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
 
−
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
 
−
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Putative Acyl-COA dehydrogenase}}
+
{{#set: common name=menaquinol-cytochrome c reductase}}
−
{{#set: ec number=EC-1.3.8}}
+
{{#set: common name=Ubiquinol-cytochrome c reductase iron-sulfur subunit}}
−
{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
+
{{#set: ec number=EC-1.10.2.2}}
−
{{#set: gene associated=CHC_T00009166001_1|CHC_T00009166001}}
+
{{#set: common name=menaquinone:cytochrome c reductase}}
−
{{#set: in pathway=FAO-PWY}}
+
{{#set: gene associated=CHC_T00008759001|CHC_T00009218001_1|CHC_T00007973001_1|CHC_T00008759001_1}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Revision as of 12:34, 18 January 2018

Reaction RXN-14107

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • menaquinol-cytochrome c reductase
    • Ubiquinol-cytochrome c reductase iron-sulfur subunit
  • ec number:
  • Synonym(s):
    • menaquinone:cytochrome c reductase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12086&oldid=8770"