Difference between revisions of "PWY-7800"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17860 RXN-17860] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diph...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17860 RXN-17860] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ribonucleoside-diphosphate reductase alpha chain
 +
** ribonucleoside-diphosphate reductase beta chain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.bu EC-2.3.1.bu]
+
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ACETYL-COA]][c] '''+''' 1 [[N-terminal-L-alanine]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[N-terminal-N-Ac-L-alanine]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[UDP]][c] '''=>''' 1 [[DUDP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 acetyl-CoA[c] '''+''' 1 an N-terminal L-alanyl-[protein][c] '''=>''' 1 coenzyme A[c] '''+''' 1 an N-terminal Nα-acetyl-L-alanyl-[protein][c] '''+''' 1 H+[c]
+
** 1 a reduced thioredoxin[c] '''+''' 1 UDP[c] '''=>''' 1 dUDP[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized thioredoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[CHC_T00008864001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[CHC_T00008926001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[CHC_T00008864001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
** [[pantograph]]-[[a.taliana]]
 +
* [[CHC_T00008926001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
** [[pantograph]]-[[a.taliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
+
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 +
** '''12''' reactions found over '''17''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[galdieria.sulphuraria]]
 +
*** [[a.taliana]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[original_genome]]
 
*** [[original_genome]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28026 28026]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02018 R02018]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.3.1.bu}}
+
{{#set: common name=ribonucleoside-diphosphate reductase alpha chain}}
−
{{#set: in pathway=PWY-7800}}
+
{{#set: common name=ribonucleoside-diphosphate reductase beta chain}}
 +
{{#set: ec number=EC-1.17.4.1}}
 +
{{#set: gene associated=CHC_T00008864001|CHC_T00008926001|CHC_T00008864001_1|CHC_T00008926001_1}}
 +
{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=original_genome}}
 
{{#set: reconstruction source=original_genome}}

Revision as of 12:35, 18 January 2018

Reaction UDPREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonucleoside-diphosphate reductase alpha chain
    • ribonucleoside-diphosphate reductase beta chain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a reduced thioredoxin[c] + 1 UDP[c] => 1 dUDP[c] + 1 H2O[c] + 1 an oxidized thioredoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over 17 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-7800&oldid=8791"