Difference between revisions of "PWY-7800"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17860 RXN-17860] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diph...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
+ | * common name: | ||
+ | ** ribonucleoside-diphosphate reductase alpha chain | ||
+ | ** ribonucleoside-diphosphate reductase beta chain | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[UDP]][c] '''=>''' 1 [[DUDP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-Thioredoxin]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 a reduced thioredoxin[c] '''+''' 1 UDP[c] '''=>''' 1 dUDP[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized thioredoxin[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[CHC_T00008864001]] | ||
+ | ** ORIGINAL_GENOME | ||
+ | ***AUTOMATED-NAME-MATCH | ||
+ | * [[CHC_T00008926001]] | ||
+ | ** ORIGINAL_GENOME | ||
+ | ***AUTOMATED-NAME-MATCH | ||
+ | * [[CHC_T00008864001_1]] | ||
+ | ** [[pantograph]]-[[galdieria.sulphuraria]] | ||
+ | ** [[pantograph]]-[[a.taliana]] | ||
+ | * [[CHC_T00008926001_1]] | ||
+ | ** [[pantograph]]-[[galdieria.sulphuraria]] | ||
+ | ** [[pantograph]]-[[a.taliana]] | ||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184] |
− | ** ''' | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
+ | * [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] | ||
+ | ** '''12''' reactions found over '''17''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * [[orthology]]: | ||
+ | ** [[pantograph]]: | ||
+ | *** [[galdieria.sulphuraria]] | ||
+ | *** [[a.taliana]] | ||
* [[annotation]]: | * [[annotation]]: | ||
** [[pathwaytools]]: | ** [[pathwaytools]]: | ||
*** [[original_genome]] | *** [[original_genome]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28026 28026] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02018 R02018] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: ec number=EC- | + | {{#set: common name=ribonucleoside-diphosphate reductase alpha chain}} |
− | {{#set: in pathway=PWY- | + | {{#set: common name=ribonucleoside-diphosphate reductase beta chain}} |
+ | {{#set: ec number=EC-1.17.4.1}} | ||
+ | {{#set: gene associated=CHC_T00008864001|CHC_T00008926001|CHC_T00008864001_1|CHC_T00008926001_1}} | ||
+ | {{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}} | ||
+ | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction tool=pantograph}} | ||
+ | {{#set: reconstruction source=galdieria.sulphuraria|a.taliana}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction source=original_genome}} | {{#set: reconstruction source=original_genome}} |
Revision as of 11:35, 18 January 2018
Contents
Reaction UDPREDUCT-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- ribonucleoside-diphosphate reductase alpha chain
- ribonucleoside-diphosphate reductase beta chain
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Red-Thioredoxin[c] + 1 UDP[c] => 1 DUDP[c] + 1 WATER[c] + 1 Ox-Thioredoxin[c]
- With common name(s):
- 1 a reduced thioredoxin[c] + 1 UDP[c] => 1 dUDP[c] + 1 H2O[c] + 1 an oxidized thioredoxin[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- CHC_T00008864001
- ORIGINAL_GENOME
- AUTOMATED-NAME-MATCH
- ORIGINAL_GENOME
- CHC_T00008926001
- ORIGINAL_GENOME
- AUTOMATED-NAME-MATCH
- ORIGINAL_GENOME
- CHC_T00008864001_1
- CHC_T00008926001_1
Pathways
- PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
- 8 reactions found over 9 reactions in the full pathway
- PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
- 12 reactions found over 17 reactions in the full pathway
Reconstruction information
External links