R223-RXN

Reaction R223-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • octanoyl-CoA ligase
  • long-chain-fatty-acid-CoA ligase
• ec number:
  • EC-6.2.1.3
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ATP[c] + 1 CO-A[c] + 1 CPD-195[c] => 1 AMP[c] + 1 PPI[c] + 1 CPD-196[c]
• With common name(s):
  • 1 ATP[c] + 1 coenzyme A[c] + 1 octanoate[c] => 1 AMP[c] + 1 diphosphate[c] + 1 octanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: CHC_T00008160001_1
  • Source: orthology-galdieria.sulphuraria
• Gene: CHC_T00008811001
  • Source: annotation-original_genome
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: CHC_T00009428001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00009428001
  • Source: annotation-original_genome
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: CHC_T00008500001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00008811001_1
  • Source: orthology-galdieria.sulphuraria

Pathways

• P221-PWY, octane oxidation: P221-PWY
  • 3 reactions found over 5 reactions in the full pathway
• PWY-6920, 6-gingerol analog biosynthesis (engineered): PWY-6920
  • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-galdieria.sulphuraria
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-original_genome
    • Tool: pathwaytools