Manual

	Common name	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Reconstruction comment	Gene associated	In pathway
3-PHOSPHOGLYCERATE-PHOSPHATASE-RXN		EC-3.1.3.38	Manual		Manual-reactions to add	Added to produce glycerate
ALANINE-DEHYDROGENASE-RXN		EC-1.4.1.1	Manual		Manual-ala dehy	Added for fba	CHC T00008930001	PWY1-2
ARGININE-2-MONOOXYGENASE-RXN		EC-1.13.12.1	Manual		Manual-reactions to add	Is an essential reaction of e.siliculosus		ARGDEG-V-PWY
BIOMASS-RXN			Manual		Reaction of biomass production
Biomass rxn			Manual		Manual-biomass reaction	Forfba
C-22 sterol desaturase			Manual		Manual-new reactions curation	Ab initio inference	CYP FMO
Exchange BIOMASS			Manual		Manual-biomass reaction	Exchange biomass to boundary
ExchangeDeadEnd ACET			Manual		Reaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd ADP			Manual		Reaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd CARBON-DIOXIDE			Manual		Reaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd CO-A			Manual		Reaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd FUM			Manual		Reaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd NAD			Manual		Reaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd SUC			Manual		Reaction added to avoid biomass-compositions accumulation
ExchangeSeed ACP			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed ADENOSYLCOBALAMIN			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed ADP			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed AMMONIA			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed AMMONIUM			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed AMP			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed ATP			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed BIOTIN			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CA+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CARBON-DIOXIDE			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CDP			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CL-			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CO+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed COB-I-ALAMIN			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-3			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-315			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed EDTA			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+3			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed GDP			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed GTP			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed K+			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed Light			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed MG+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed MN+2			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NA+			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NAD			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NAD+			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NADH			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NITRATE			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed OXYGEN-MOLECULE			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed PPI			Manual		Added to manage seeds from boundary to extracellular compartment
ExchangeSeed PROTON			Manual		Manual-import from medium	Added to manage seeds from boundary to extracellular compartment
ExchangeSeed Pi			Manual		Added to manage seeds from boundary to extracellular compartment
... further results