Manual-pathmodel inference
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COMMON NAME
Ec number
Reconstruction category
Reconstruction tool
Reconstruction source
Reconstruction comment
Gene associated
In pathway
RXN-17368
EC-6.3.4
Gap-filling
Manual
Meneco
Gap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference
Added for gapfilling
Meneco;brawley2017;tblastn
Scaffold115 51547 52668
PWY-7751
RXN-17371
EC-6.3.2
Gap-filling
Manual
Meneco
Gap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference
Added for gapfilling
Meneco;brawley2017;tblastn
Scaffold115 53074 54093
RXN-17372
EC-4.2.3.154
Gap-filling
Manual
Meneco
Gap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference
Added for gapfilling
Dhq synthase domain;meneco;brawley2017
CHC T00001829001
PWY-7751
RXN-17896
EC-2.1.1
Gap-filling
Manual
Meneco
Gap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference
Added for gapfilling
Methyltransf 3 domain;meneco;brawley2017
CHC T00001829001
PWY-7751
SQUALENE-MONOOXYGENASE-RXN
EC-1.14.14.17
Manual
Manual-pathmodel inference
Tblastn plus rnaseq evidence
Scaffold20 461442 460650
Scaffold90 7511 6165
Scaffold57 152407 364140
PWY-5670
PWY-6098
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Metabolic network components
Reaction
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Metabolite
Reconstruction categories
annotation
gap-filling
manual
orthology
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meneco
pantograph
pathwaytools
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annotation-original_genome
gap-filling-gapfilling_solution_with_meneco_draft_medium
manual-ala_dehy
manual-biomass_reaction
manual-import_from_medium
manual-new_reactions_curation
manual-pathmodel_inference
manual-pathmodel_inference_new_rxn
manual-pathmodel_inference_new_rxn_2
manual-reactions_to_add
manual-reactions_to_add_2
orthology-arabidopsis_thaliana
orthology-ectocarpus_siliculosus
orthology-galdieria.sulphuraria
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