TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN

Reaction TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN

• direction:
  • LEFT-TO-RIGHT
• ec number:
  • EC-5.4.99.12
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 tRNA-uridine-38-40[c] => 1 tRNA-pseudouridine-38-40[c]
• With common name(s):
  • 1 a uridine38-40 in tRNA[c] => 1 a pseudouridine38-40 in tRNA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: CHC_T00006579001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00003130001_1
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00006204001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00001139001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00005989001_1
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00009542001_1
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00006048001_1
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00004120001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00007304001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00001402001_1
  • Source: orthology-galdieria.sulphuraria
• Gene: CHC_T00001369001_1
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00006828001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00006820001_1
  • Source: orthology-ectocarpus_siliculosus

Reconstruction information

• Category: orthology
  • Source: orthology-galdieria.sulphuraria
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links

• LIGAND-RXN:
  • R03020
• UNIPROT:
  • Q59069
  • P47428
  • P45291
  • Q45557
  • Q50291
  • P53167
  • Q12211
  • P73295
  • P07649