Difference between revisions of "Orthology"

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Latest revision as of 21:28, 25 March 2018

 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
1.1.1.271-RXNEC-1.1.1.271Orthology
Manual
PantographManual-imperaili
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-bosea
Ec-01 003130PWY-66
1.1.1.34-RXNHydroxymethylglutaryl-CoA reductase (NADPH)
Hydroxymethylglutaryl-CoA reductase, class I/II
Hydroxymethylglutaryl-CoA reductase, N-terminal
EC-1.1.1.34Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Manual-marino
Manual-bosea
Ec-03 000570
Ec-03 000580
Ec-08 002990
Ec-27 005710
PWY-922
PWY-6174
PWY-7391
PWY-7524
1.14.13.79-RXNEnt-kaurenoate monooxygenaseOrthologyPantographOrthology-aragemEc-00 005820
Ec-00 005850
Ec-10 006240
PWY-5047
PWY-5034
1.3.7.4-RXNEC-1.3.7.4OrthologyPantographOrthology-aragemEc-22 000060PWY-7170
1.6.5.4-RXNMonodehydroascorbate reductase (NADH)EC-1.6.5.4Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-22 003850
Ec-26 002470
PWY-6370
1TRANSKETO-RXNEC-2.2.1.1Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-20 002600P124-PWY
CALVIN-PWY
P21-PWY
PWY-5723
PWY-1861
P185-PWY
NONOXIPENT-PWY
2-ISOPROPYLMALATESYN-RXN2-Isopropylmalate synthaseEC-2.3.3.13Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-28 002630
Ec-18 000460
LEUSYN-PWY
PWY-6871
2-KETO-ADIPATE-DEHYDROG-RXNOrthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-25 000020
Ec-27 004160
PWY-5652
PWY66-425
LYSINE-DEG1-PWY
2.3.1.176-RXNEC-2.3.1.176OrthologyPantographOrthology-aragemEc-26 003940PWY-6061
2.4.1.117-RXNDolichyl-phosphate beta-glucosyltransferase, family GT2EC-2.4.1.117Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-imperaili
Orthology-aragem
Manual-marino
Ec-06 003490MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
2.4.1.46-RXNMonogalactosyldiacylglycerol synthase, family GT28EC-2.4.1.46Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-26 002880
Ec-20 002530
Ec-26 002980
PWY-401
2.4.1.67-RXNEC-2.4.1.67OrthologyPantographOrthology-aragemEc-17 000840
Ec-26 006290
PWY-5337
2.5.1.19-RXN3-Phosphoshikimate 1-CarboxyvinyltransferaseEC-2.5.1.19Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-26 000800PWY-6163
2.7.1.148-RXNGHMP kinase N-terminal domainEC-2.7.1.148Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-10 001370NONMEVIPP-PWY
PWY-7560
2.7.7.14-RXNRossmann-like alpha/beta/alpha sandwich foldEC-2.7.7.14Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-07 004830PWY-7782
PWY4FS-6
2.7.8.15-RXNGlycosyl transferase, family 4EC-2.7.8.15Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-07 007020MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
2PGADEHYDRAT-RXNPhosphopyruvate hydratase
Enolase
EC-4.2.1.11Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-14 005400
Ec-26 004120
Ec-27 004000
PWY-1042
P341-PWY
PWY-2221
PWY-1622
PWY66-399
GLYCOLYSIS
PWY-6901
PWY-7218
NPGLUCAT-PWY
P124-PWY
ANAGLYCOLYSIS-PWY
PWY-5723
PWY-6142
GLUCONEO-PWY
PWY-5484
PWY-7124
PWY-6886
P122-PWY
PWY-7003
2TRANSKETO-RXNEC-2.2.1.1Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-20 002600PWY-6901
CALVIN-PWY
P21-PWY
PWY-5723
PWY-1861
P185-PWY
NONOXIPENT-PWY
3-DEHYDROQUINATE-DEHYDRATASE-RXN3-dehydroquinate dehydrataseEC-4.2.1.10Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-07 000550
Ec-02 006010
Ec-26 004120
Ec-14 005400
PWY-6163
PWY-6416
QUINATEDEG-PWY
PWY-6707
3-DEHYDROQUINATE-SYNTHASE-RXN3-dehydroquinate synthase
3-dehydroquinate synthase AroB
EC-4.2.3.4Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-06 009700
Ec-00 002010
Ec-24 000340
PWY-6164
3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXNEC-1.1.1.157Orthology
Manual
PantographManual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-bosea
Ec-19 005290
3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXNNADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domainEC-1.1.1.31Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-roseov134
Manual-marino
Manual-bosea
Ec-14 006530
Ec-11 000140
VALDEG-PWY
3-ISOPROPYLMALDEHYDROG-RXN3-isopropylmalate dehydrogenase
Β-isopropylmalic enzyme
Threo-Ds-3-isopropylmalate dehydrogenase
Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-16 002120LEUSYN-PWY
PWY-6871
3-ISOPROPYLMALISOM-RXN3-isopropylmalate dehydratase
Aconitase/3-isopropylmalate dehydratase, swivel
(2R,3S)-3-isopropylmalate hydro-lyase
Β-isopropylmalate dehydratase
Α-isopropylmalate isomerase
3-isopropylmalate hydro-lyase
Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-sdr f 000030
Ec-13 001950
Ec-12 000170
LEUSYN-PWY
PWY-6871
3-OXOACYL-ACP-SYNTH-BASE-RXNBeta-ketoacyl synthase, N-terminal
Thiolase-like, subgroup
Beta-ketoacyl synthase, partial
EC-2.3.1.86
EC-2.3.1.85
EC-2.3.1.41
Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-27 002090
Ec-12 000650
Ec-12 000640
Ec-27 003480
PWY-5965
PWY-5966
FASYN-INITIAL-PWY
PWY-7388
3-SULFINOALANINE-AMINOTRANSFERASE-RXNEC-2.6.1OrthologyPantographOrthology-aragemEc-03 003270CYSTEINE-DEG-PWY
3.1.3.46-RXNEC-3.1.3.46Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-14 004360PWY66-423
3.1.3.57-RXNEC-3.1.3.57Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-14 006130PWY-6363
3.1.3.67-RXNEC-3.1.3.67OrthologyPantographOrthology-aragemEc-21 001920
Ec-21 001950
PWY-6368
3PGAREARR-RXNPhosphoglycerate mutaseEC-5.4.2.12Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-03 002160
Ec-03 002170
Ec-01 000980
Ec-06 009930
Ec-27 000330
Ec-24 002670
Ec-10 005410
PWY-1042
P341-PWY
PWY-2221
GLUCONEO-PWY
GLYCOLYSIS
PWY-6901
PWY-7218
P124-PWY
PWY-6886
PWY-5723
PWY-6142
PWY-5484
PWY-7124
PWY-7003
4-COUMARATE--COA-LIGASE-RXNEC-6.2.1.12OrthologyPantographOrthology-aragemEc-10 001480
Ec-04 001280
PWY-6920
PWY-6435
PWY1F-FLAVSYN
PWY-7046
PWY-361
PWY-7397
PWY-6320
PWY-7398
PWY-5754
PWY-5135
PWY-6982
4-HYDROXY-2-KETOPIMELATE-LYSIS-RXNEC-4.1.2.52Orthology
Manual
PantographOrthology-aragem
Manual-sphingo361
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-roseov134
Manual-bosea
Ec-11 0024603-HYDROXYPHENYLACETATE-DEGRADATION-PWY
4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXNGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseEC-1.13.11.27Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-23 003630PWY-1581
PWY-7432
TYRFUMCAT-PWY
PWY-1422
4.4.1.14-RXN1-aminocyclopropane-1-carboxylate synthaseEC-4.4.1.14Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-04 003460ETHYL-PWY
PWY-7270
5-OXOPROLINASE-ATP-HYDROLYSING-RXN5-oxoprolinase (ATP-hydrolysing)EC-3.5.2.9Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-bosea
Ec-01 005550PWY-4041
6.2.1.34-RXNEC-6.2.1.34OrthologyPantographOrthology-aragemEc-10 001480
Ec-04 001280
PWY-6343
PWY-1121
6PFRUCTPHOS-RXN6-phosphofructokinaseEC-2.7.1.11Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-12 002540
Ec-14 003880
Ec-22 000070
PWY-1042
GLYCOLYSIS
PWY-7385
PWY-1861
ANAGLYCOLYSIS-PWY
PWY-5484
6PGLUCONOLACT-RXN6-PhosphogluconolactonaseEC-3.1.1.31Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-02 004960P122-PWY
RUMP-PWY
OXIDATIVEPENT-PWY
GLYCOLYSIS-E-D
ACETYL-COA-ACETYLTRANSFER-RXNThiolase, C-terminal
Acetyl-CoA acetyltransferase
EC-2.3.1.9Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-26 003940
Ec-24 000870
Ec-22 002850
P162-PWY
PWY-5177
PWY-6583
P163-PWY
PWY-6883
PWY-5676
PWY-6588
PWY-7779
PWY-7778
PWY1-3
PWY-5789
PWY-6876
CENTFERM-PWY
PWY-7391
PWY-5741
PWY-6174
ACETOACETATE-DEG-PWY
PWY66-367
PWY-7216
PWY-922
PWY66-368
PWY-7401
PWY-6863
PWY-7524
ACETYL-COA-CARBOXYLTRANSFER-RXNAcetyl-CoA carboxylase, partial
Acetyl-CoA carboxylase
EC-6.4.1.2Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-03 001890
Ec-14 002460
Ec-19 003230
Ec-19 003040
Ec-01 009720
Ec-01 010970
Ec-20 002520
PWY-7388
PWY-6722
PWY-5743
PWY-5744
PWY-5789
PWY-6679
PWY-4381
ACETYLGLUTKIN-RXNAspartate/glutamate/uridylate kinaseEC-2.7.2.8Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-24 000610PWY-5154
GLUTORN-PWY
ARGSYNBSUB-PWY
ACETYLORNDEACET-RXNEC-3.5.1.16Orthology
Manual
PantographManual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-12 000150
Ec-14 002670
GLUTORN-PWY
ADCLY-RXNEC-4.1.3.38Orthology
Manual
PantographManual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-01 007170PWY-6543
ADDALT-RXNAdenosine/AMP deaminase domain
Adenosine deaminase
EC-3.5.4.4Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-imperaili
Manual-marino
Manual-bosea
Ec-04 003130
Ec-00 010560
PWY-7179
PWY-7179-1
ADENODEAMIN-RXNAdenosine/AMP deaminase domain
Adenosine deaminase
EC-3.5.4.4Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-04 003130
Ec-00 010560
PWY0-1296
PWY-6609
SALVADEHYPOX-PWY
PWY-6611
ADENOSYLHOMOCYSTEINASE-RXNEC-3.3.1.1Orthology
Manual
PantographManual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-22 002610METHIONINE-DEG1-PWY
PWY-5041
ADENPRIBOSYLTRAN-RXNEC-2.4.2.7Orthology
Manual
PantographManual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-28 000520
Ec-01 006480
PWY-6605
P121-PWY
PWY-6610
ADENYL-KIN-RXNAdenylate kinase family protein
Adenylate kinase
Adenylate kinase/UMP-CMP kinase
UMP-CMP kinase
Alpha-D-phosphohexomutase, C-terminal
EC-2.7.4.3Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-16 005090
Ec-00 009240
Ec-06 003080
Ec-14 004920
Ec-12 005110
Ec-16 004100
Ec-07 003680
Ec-01 006380
Ec-15 000120
PWY-7219
ADENYLYLSULFKIN-RXNAdenylylsulfate kinaseEC-2.7.1.25Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-19 000180PWY-5340
ADPREDUCT-RXNADP reductase
Ribonucleoside-diphosphate reductase small chain
Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
EsV-1-128
EsV-1-180
EC-1.17.4.1Orthology
Manual
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Ec-21 002920
Ec-06 005120
Ec-06 005570
Ec-19 000440
Ec-11 002180
Ec-17 003700
Ec-11 002170
PWY-7220
PWY-7227
... further results