Difference between revisions of "Pathwaytools"

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Latest revision as of 21:28, 25 March 2018

 COMMON NAMEEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXNEC-2.3.1.51Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-12 004670
Ec-21 003240
Ec-02 006160
Ec-26 001280		PWY0-1319
PWY-5981
1-PHOSPHATIDYLINOSITOL-3-KINASE-RXNEC-2.7.1.137AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-04 003810
Ec-12 006380		PWY-6352
1-PHOSPHATIDYLINOSITOL-KINASE-RXNEC-2.7.1.67AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-06 009510PWY-6352
PWY-6351
1.1.1.145-RXNEC-1.1.1.145AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-06 002740
Ec-15 000670
Ec-21 001850
1.1.1.170-RXNEC-1.1.1.170AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-21 001850
1.1.1.178-RXNEC-1.1.1.178Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		PWY-5109
ILEUDEG-PWY
1.1.1.34-RXNEC-1.1.1.34Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-esiliculosus genome
Orthology-aragem
Manual-marino
Manual-bosea		Ec-03 000570
Ec-03 000580
Ec-08 002990
Ec-27 005710		PWY-922
PWY-6174
PWY-7391
PWY-7524
1.1.1.39-RXNEC-1.1.1.38
EC-1.1.1.39		Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-01 003680
Ec-07 002070
Ec-07 002060		PWY-3641
GLUCONEO-PWY
PWY-7384
PWY-7686
PWY-7115
PWY-7118
1.1.1.8-RXNEC-1.1.1.8Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-19 004200
Ec-27 006990
Ec-19 001930		PWY-6118
PWY-7411
PWY-7385
1.10.2.2-RXNEC-1.10.2.2Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-roseov134
Manual-marino
Manual-bosea		Ec-21 004500
Ec-25 001440
Ec-08 003040
Ec-01 002540
Ec-18 002810		PWY-7082
PWY-3781
PWY-7279
1.11.1.15-RXNEC-1.11.1.15Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-21 005650
Ec-01 002340
1.14.11.18-RXNEC-1.14.11.18Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-imperaili
Manual-roseov134
Manual-hoflea
Manual-roseov420		Ec-22 003660
Ec-01 011990
Ec-01 001740
Ec-23 003040
1.14.13.70-RXNEC-1.14.13.70AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-10 006240PWY-2541
1.14.13.8-RXNEC-1.14.13.8Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-roseov134
Manual-marino		Ec-11 003800
Ec-25 003590
Ec-06 000440
Ec-00 002320
Ec-06 002080
Ec-01 005560
1.14.19.1-RXNEC-1.14.19.1Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-imperaili
Manual-marino
Manual-bosea		Ec-26 001950PWY-5996
1.14.19.3-RXNEC-1.14.19.3Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-imperaili		Ec-24 002300PWY-6000
1.14.21.6-RXNEC-1.14.19.20AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-01 003780PWY66-341
PWY66-3
1.17.4.2-RXNEC-1.17.4.2AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-04 006460
1.18.1.2-RXNEC-1.18.1.2Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-marino
Manual-sphingo361
Manual-bosea		Ec-03 002800PWY-7230
PWY-101
1.2.1.13-RXNEC-1.2.1.13Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-roseov134
Manual-marino
Manual-bosea		CALVIN-PWY
1.2.1.25-RXNEC-1.2.1.25Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-roseov134
Manual-marino
Manual-bosea		Ec-06 009010VALDEG-PWY
1.2.1.27-RXNEC-1.2.1.27Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-roseov134
Manual-marino
Manual-bosea		Ec-10 003810
Ec-06 003440		PWY-5642
1.2.1.31-RXNEC-1.2.1.31AnnotationPathwaytoolsAnnotation-esiliculosus genomeLYSINE-DEG1-PWY
1.2.1.65-RXNEC-1.2.1.65Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		PWY-5427
1.2.4.4-RXNEC-1.2.4.4Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-06 009010
Ec-10 006360		PWY-5046
1.21.3.1-RXNEC-1.21.3.1AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-08 003510PWY-5629
1.3.1.9-RXNEC-1.3.1.9Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-27 002470
1.3.7.3-RXNEC-1.3.7.3AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-22 000060PWY-7579
PWY-5915
1.3.99.5-RXNEC-1.3.1.22AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-02 006180
1.5.1.15-RXNEC-1.5.1.15Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-roseov134
Manual-marino
Manual-bosea		PWY-2201
1.5.1.19-RXNEC-1.5.1.19AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-10 001890
1.5.1.20-RXNEC-1.5.1.20Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-08 003880
Ec-03 002180		PWY-2201
1CMET2-PWY
CODH-PWY
PWY-3841
1.5.1.8-RXNEC-1.5.1.8Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-imperaili		LYSINE-DEG1-PWY
1.5.1.9-RXNEC-1.5.1.9Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-imperaili
Manual-rhizobi		Ec-07 005660LYSINE-DEG1-PWY
1.5.5.1-RXNEC-1.5.5.1Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-roseov134
Manual-marino
Manual-bosea		Ec-23 002110
1.6.5.4-RXNEC-1.6.5.4Orthology
Annotation		Pantograph
Pathwaytools		Annotation-esiliculosus genome
Orthology-aragem		Ec-22 003850
Ec-26 002470		PWY-6370
1.8.1.4-RXNEC-1.8.1.4Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-25 000020
Ec-27 004160
1.8.3.5-RXNEC-1.8.3.5AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-12 001550
1.8.4.12-RXNEC-1.8.4.12Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-05 006220
Ec-28 000030
Ec-12 004320
Ec-27 006120
Ec-00 006660
1.8.4.14-RXNEC-1.8.4.14AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-05 006220
1.8.4.7-RXNEC-1.8.4.7AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-06 005300
1.8.4.8-RXNEC-1.8.4.8Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-26 002130SO4ASSIM-PWY
1.8.5.1-RXNEC-1.8.5.1AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-02 003740PWY-6370
PWY-2261
13-BETA-GLUCAN-SYNTHASE-RXNEC-2.4.1.34AnnotationPathwaytoolsAnnotation-esiliculosus genomeEc-08 004920
Ec-00 000820
Ec-08 004800
Ec-12 000870
Ec-08 004910
Ec-28 002440		PWY-6773
1TRANSKETO-RXNEC-2.2.1.1Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-20 002600P124-PWY
CALVIN-PWY
P21-PWY
PWY-5723
PWY-1861
P185-PWY
NONOXIPENT-PWY
2-AMINOADIPATE-AMINOTRANSFERASE-RXNEC-2.6.1.39Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-roseov134
Manual-hoflea
Manual-roseov420
Manual-bosea		PWY-3081
PWY-5283
PWY66-425
LYSINE-DEG1-PWY
LYSINE-AMINOAD-PWY
2-DEHYDROPANTOATE-REDUCT-RXNEC-1.1.1.169Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-14 006010PANTO-PWY
PWY-6654
2-ISOPROPYLMALATESYN-RXNEC-2.3.3.13Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-esiliculosus genome
Manual-erythro
Orthology-aragem
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		Ec-28 002630
Ec-18 000460		LEUSYN-PWY
PWY-6871
2-KETO-ADIPATE-DEHYDROG-RXNOrthology
Annotation		Pantograph
Pathwaytools		Annotation-esiliculosus genome
Orthology-aragem		Ec-25 000020
Ec-27 004160		PWY-5652
PWY66-425
LYSINE-DEG1-PWY
2-METHYLACYL-COA-DEHYDROGENASE-RXNEC-1.3.8.5Manual
Annotation		PathwaytoolsAnnotation-esiliculosus genome
Manual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea		PWY-5109
ILEUDEG-PWY
... further results
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