Difference between revisions of "Orthology"

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(Created page with "Category:Gene == Gene Ec-22_001020 == * left end position: ** 1185514 * transcription direction: ** NEGATIVE * right end position: ** 1199836 * centisome position: ** 26.2...")
(Created page with "{{#ask: Category:Reaction reconstruction category::orthology | ?common name | ?ec number | ?reconstruction category | ?reconstruction tool | ?reconstruction source | ?...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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{{#ask: [[Category:Reaction]] [[reconstruction category::orthology]]
== Gene Ec-22_001020 ==
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| ?common name
* left end position:
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| ?ec number
** 1185514
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| ?reconstruction category
* transcription direction:
+
| ?reconstruction tool
** NEGATIVE
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| ?reconstruction source
* right end position:
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| ?reconstruction comment
** 1199836
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| ?gene associated
* centisome position:
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| ?in pathway
** 26.252285   
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}}
* Synonym(s):
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** Esi_0065_0126
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** Esi0065_0126
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** RME1L2
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== Reactions associated ==
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* [[HYDROG-RXN]]
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** esiliculosus_genome
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***go-term
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== Pathways associated ==
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* [[PWY-6780]]
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* [[PWY4LZ-257]]
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* [[PWY-6785]]
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* [[PWY-6759]]
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* [[GLUDEG-II-PWY]]
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== External links  ==
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{{#set: left end position=1185514}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: right end position=1199836}}
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{{#set: centisome position=26.252285    }}
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{{#set: common name=Esi_0065_0126|Esi0065_0126|RME1L2}}
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{{#set: reaction associated=HYDROG-RXN}}
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{{#set: pathway associated=PWY-6780|PWY4LZ-257|PWY-6785|PWY-6759|GLUDEG-II-PWY}}
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Latest revision as of 20:02, 21 March 2018

 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
1.1.1.271-RXNEC-1.1.1.271OrthologyPantographOrthology-aragemEc-01 003130PWY-66
1.1.1.34-RXNHydroxymethylglutaryl-CoA reductase (NADPH)
Hydroxymethylglutaryl-CoA reductase, class I/II
Hydroxymethylglutaryl-CoA reductase, N-terminal
EC-1.1.1.34Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-03 000580
Ec-03 000570
Ec-08 002990
Ec-27 005710
PWY-922
PWY-6174
PWY-7391
PWY-7524
1.14.13.79-RXNEnt-kaurenoate monooxygenaseOrthologyPantographOrthology-aragemEc-10 006240
Ec-00 005850
Ec-00 005820
PWY-5047
PWY-5034
1.3.7.4-RXNEC-1.3.7.4OrthologyPantographOrthology-aragemEc-22 000060PWY-7170
1.6.5.4-RXNMonodehydroascorbate reductase (NADH)EC-1.6.5.4Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-22 003850
Ec-26 002470
PWY-6370
1TRANSKETO-RXNEC-2.2.1.1Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-20 002600P124-PWY
CALVIN-PWY
P21-PWY
PWY-5723
PWY-1861
P185-PWY
NONOXIPENT-PWY
2-ISOPROPYLMALATESYN-RXN2-Isopropylmalate synthaseEC-2.3.3.13Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-18 000460
Ec-28 002630
LEUSYN-PWY
PWY-6871
2-KETO-ADIPATE-DEHYDROG-RXNOrthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-27 004160
Ec-25 000020
PWY-5652
PWY66-425
LYSINE-DEG1-PWY
2.3.1.176-RXNEC-2.3.1.176OrthologyPantographOrthology-aragemEc-26 003940PWY-6061
2.4.1.117-RXNDolichyl-phosphate beta-glucosyltransferase, family GT2EC-2.4.1.117Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-06 003490MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
2.4.1.46-RXNMonogalactosyldiacylglycerol synthase, family GT28EC-2.4.1.46Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-26 002880
Ec-26 002980
Ec-20 002530
PWY-401
2.4.1.67-RXNEC-2.4.1.67OrthologyPantographOrthology-aragemEc-17 000840
Ec-26 006290
PWY-5337
2.5.1.19-RXN3-Phosphoshikimate 1-CarboxyvinyltransferaseEC-2.5.1.19Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-26 000800PWY-6163
2.7.1.148-RXNGHMP kinase N-terminal domainEC-2.7.1.148Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-10 001370NONMEVIPP-PWY
PWY-7560
2.7.1.68-RXNPhosphatidylinositol-4-phosphate 5-kinase, core
Phosphatidylinositol-4-phosphate 5-kinase its3
Phosphatidylinositol-4-phosphate 5-kinase
EC-2.7.1.68Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-02 002790
Ec-13 001240
Ec-05 001250
Ec-19 000710
Ec-04 001040
PWY-6352
PWY-6351
2.7.7.14-RXNRossmann-like alpha/beta/alpha sandwich foldEC-2.7.7.14Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-07 004830PWY-7782
PWY4FS-6
2.7.7.15-RXNCytidyltransferase-like domainEC-2.7.7.15Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-15 001610PWY4FS-2
PWY-7782
PWY-3561
PWY3O-450
2.7.8.15-RXNGlycosyl transferase, family 4EC-2.7.8.15Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-07 007020MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
2PGADEHYDRAT-RXNPhosphopyruvate hydratase
Enolase
EC-4.2.1.11Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-26 004120
Ec-14 005400
Ec-27 004000
PWY-1042
P341-PWY
PWY-2221
PWY-7124
PWY-1622
GLUCONEO-PWY
GLYCOLYSIS
PWY-6901
PWY-7218
NPGLUCAT-PWY
P124-PWY
ANAGLYCOLYSIS-PWY
PWY-5723
PWY-6142
P122-PWY
PWY-7003
PWY-6886
PWY-5484
PWY66-399
2TRANSKETO-RXNEC-2.2.1.1Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-20 002600PWY-6901
CALVIN-PWY
P21-PWY
PWY-5723
PWY-1861
P185-PWY
NONOXIPENT-PWY
3-DEHYDROQUINATE-DEHYDRATASE-RXN3-dehydroquinate dehydrataseEC-4.2.1.10Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-14 005400
Ec-26 004120
Ec-02 006010
Ec-07 000550
PWY-6163
QUINATEDEG-PWY
PWY-6416
PWY-6707
3-DEHYDROQUINATE-SYNTHASE-RXN3-dehydroquinate synthase
3-dehydroquinate synthase AroB
EC-4.2.3.4Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-00 002010
Ec-24 000340
Ec-06 009700
PWY-6164
3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXNEC-1.1.1.157OrthologyPantographOrthology-aragemEc-19 005290
3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXNNADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domainEC-1.1.1.31Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-14 006530
Ec-11 000140
VALDEG-PWY
3-ISOPROPYLMALDEHYDROG-RXN3-isopropylmalate dehydrogenase
Β-isopropylmalic enzyme
Threo-Ds-3-isopropylmalate dehydrogenase
Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-16 002120LEUSYN-PWY
PWY-6871
3-ISOPROPYLMALISOM-RXN3-isopropylmalate dehydratase
Aconitase/3-isopropylmalate dehydratase, swivel
(2R,3S)-3-isopropylmalate hydro-lyase
Β-isopropylmalate dehydratase
Α-isopropylmalate isomerase
3-isopropylmalate hydro-lyase
Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-13 001950
Ec-sdr f 000030
Ec-12 000170
LEUSYN-PWY
PWY-6871
3-OXOACYL-ACP-SYNTH-BASE-RXNBeta-ketoacyl synthase, N-terminal
Thiolase-like, subgroup
Beta-ketoacyl synthase, partial
EC-2.3.1.86
EC-2.3.1.85
EC-2.3.1.41
Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-12 000650
Ec-27 003480
Ec-27 002090
Ec-12 000640
PWY-5965
PWY-5966
FASYN-INITIAL-PWY
PWY-7388
3-SULFINOALANINE-AMINOTRANSFERASE-RXNEC-2.6.1OrthologyPantographOrthology-aragemEc-03 003270CYSTEINE-DEG-PWY
3.1.3.46-RXNEC-3.1.3.46Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-14 004360PWY66-423
3.1.3.57-RXNEC-3.1.3.57Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-14 006130PWY-6363
3.1.3.67-RXNEC-3.1.3.67OrthologyPantographOrthology-aragemEc-21 001920
Ec-21 001950
PWY-6368
3PGAREARR-RXNPhosphoglycerate mutaseEC-5.4.2.12Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-06 009930
Ec-10 005410
Ec-24 002670
Ec-03 002170
Ec-03 002160
Ec-27 000330
Ec-01 000980
PWY-1042
P341-PWY
PWY-2221
GLUCONEO-PWY
GLYCOLYSIS
PWY-6901
PWY-7218
P124-PWY
PWY-6886
PWY-5723
PWY-6142
PWY-5484
PWY-7124
PWY-7003
4-COUMARATE--COA-LIGASE-RXNEC-6.2.1.12OrthologyPantographOrthology-aragemEc-04 001280
Ec-10 001480
PWY-6920
PWY-6435
PWY1F-FLAVSYN
PWY-7046
PWY-361
PWY-7397
PWY-6320
PWY-7398
PWY-5754
PWY-5135
PWY-6982
4-HYDROXY-2-KETOPIMELATE-LYSIS-RXNEC-4.1.2.52OrthologyPantographOrthology-aragemEc-11 0024603-HYDROXYPHENYLACETATE-DEGRADATION-PWY
4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXNGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseEC-1.13.11.27Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-23 003630PWY-1581
PWY-7432
TYRFUMCAT-PWY
PWY-1422
4.4.1.14-RXN1-aminocyclopropane-1-carboxylate synthaseEC-4.4.1.14Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-04 003460ETHYL-PWY
PWY-7270
5-OXOPROLINASE-ATP-HYDROLYSING-RXN5-oxoprolinase (ATP-hydrolysing)EC-3.5.2.9Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-01 005550PWY-4041
6-PHOSPHOFRUCTO-2-KINASE-RXN6-phosphofructo-2-kinaseEC-2.7.1.105Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-11 002480
Ec-14 005870
Ec-14 004360
Ec-07 005220
PWY66-423
6.2.1.34-RXNEC-6.2.1.34OrthologyPantographOrthology-aragemEc-04 001280
Ec-10 001480
PWY-6343
PWY-1121
6PFRUCTPHOS-RXN6-phosphofructokinaseEC-2.7.1.11Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-22 000070
Ec-12 002540
Ec-14 003880
PWY-1042
GLYCOLYSIS
PWY-7385
PWY-1861
ANAGLYCOLYSIS-PWY
PWY-5484
6PGLUCONDEHYDROG-RXNPhosphogluconate dehydrogenase (decarboxylating)
6PGD
6-phosphogluconic carboxylase
6-phosphogluconic dehydrogenase
Phosphogluconic acid dehydrogenase
EC-1.1.1.351Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-01 008450
Ec-12 007690
P122-PWY
6PGLUCONOLACT-RXN6-PhosphogluconolactonaseEC-3.1.1.31Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-02 004960P122-PWY
RUMP-PWY
OXIDATIVEPENT-PWY
GLYCOLYSIS-E-D
7KAPSYN-RXNPutative 8-amino-7-oxononanoate synthaseEC-2.3.1.47Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-04 002200PWY-6578
ACETYL-COA-ACETYLTRANSFER-RXNThiolase, C-terminal
Acetyl-CoA acetyltransferase
EC-2.3.1.9Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-22 002850
Ec-26 003940
Ec-24 000870
P162-PWY
PWY-5177
PWY-6583
P163-PWY
PWY-6883
PWY-5676
PWY-7778
PWY-7779
PWY-6588
PWY-6174
PWY-5789
PWY-6876
CENTFERM-PWY
PWY-7391
PWY-5741
PWY1-3
ACETOACETATE-DEG-PWY
PWY66-367
PWY-7216
PWY-922
PWY66-368
PWY-7401
PWY-6863
PWY-7524
ACETYL-COA-CARBOXYLTRANSFER-RXNAcetyl-CoA carboxylase, partial
Acetyl-CoA carboxylase
EC-6.4.1.2Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-03 001890
Ec-01 010970
Ec-01 009720
Ec-14 002460
Ec-19 003230
Ec-20 002520
Ec-19 003040
PWY-7388
PWY-5789
PWY-5743
PWY-5744
PWY-6722
PWY-6679
PWY-4381
ACETYLGLUTKIN-RXNAspartate/glutamate/uridylate kinaseEC-2.7.2.8Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-24 000610PWY-5154
GLUTORN-PWY
ARGSYNBSUB-PWY
ACETYLORNDEACET-RXNEC-3.5.1.16OrthologyPantographOrthology-aragemEc-14 002670
Ec-12 000150
GLUTORN-PWY
ACP-S-ACETYLTRANSFER-RXNEC-2.3.1.86
EC-2.3.1.85
EC-2.3.1.38
OrthologyPantographOrthology-aragemEc-27 002090
Ec-12 000650
PWY-5966
FASYN-INITIAL-PWY
ADCLY-RXNEC-4.1.3.38OrthologyPantographOrthology-aragemEc-01 007170PWY-6543
ADDALT-RXNAdenosine/AMP deaminase domain
Adenosine deaminase
EC-3.5.4.4Orthology
Annotation
Pantograph
Pathwaytools
Annotation-esiliculosus genome
Orthology-aragem
Ec-00 010560
Ec-04 003130
PWY-7179
PWY-7179-1
... further results