Difference between revisions of "PWY-5136"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA helicase family protein...")
(Created page with "Category:Gene == Gene Ec-08_002990 == * left end position: ** 2846682 * transcription direction: ** NEGATIVE * right end position: ** 2854862 * centisome position: ** 42.5...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] ==
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== Gene Ec-08_002990 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2846682
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* common name:
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* transcription direction:
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** RNA helicase family protein
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** NEGATIVE
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** Probable RNA helicase SDE3
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* right end position:
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* ec number:
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** 2854862
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** [http://enzyme.expasy.org/EC/3.6.4.13 EC-3.6.4.13]
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* centisome position:
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** 42.506405   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0281_0037
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** Esi0281_0037
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** HMGR2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.1.1.34-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Wound-RNA]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Unwound-RNA]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 H2O[c] '''+''' 1 wound RNA[c] '''+''' 1 ATP[c] '''=>''' 1 an unwound RNA[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_002420]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-07_001080]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-922]]
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* [[PWY-6174]]
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* [[PWY-7391]]
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* [[PWY-7524]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=2846682}}
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{{#set: common name=RNA helicase family protein}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Probable RNA helicase SDE3}}
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{{#set: right end position=2854862}}
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{{#set: ec number=EC-3.6.4.13}}
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{{#set: centisome position=42.506405    }}
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{{#set: gene associated=Ec-12_002420|Ec-07_001080}}
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{{#set: common name=Esi_0281_0037|Esi0281_0037|HMGR2}}
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{{#set: in pathway=}}
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{{#set: reaction associated=1.1.1.34-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-922|PWY-6174|PWY-7391|PWY-7524}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:39, 21 March 2018

Gene Ec-08_002990

  • left end position:
    • 2846682
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2854862
  • centisome position:
    • 42.506405
  • Synonym(s):
    • Esi_0281_0037
    • Esi0281_0037
    • HMGR2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5136&oldid=20494"