Difference between revisions of "Co2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GRTT GRTT] == * direction: ** LEFT-TO-RIGHT * common name: ** Geranyltranstransferase * Synonym(s):...")
 
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/co2 co2] == * common name: ** CO2 CO2 * Synonym(s): == Reaction(s) known to consume the comp...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GRTT GRTT] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/co2 co2] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** Geranyltranstransferase
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** CO2 CO2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[AIRC1]]
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** 1.0 [[ipdp]][c] '''+''' 1.0 [[grdp]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[frdp]][c]
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* [[EX_co2]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1.0 Isopentenyl diphosphate[c] '''+''' 1.0 Geranyl diphosphate[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 Farnesyl diphosphate[c]
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* [[CPPPGO]]
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* [[GND]]
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== Genes associated with this reaction  ==
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* [[OIVD2]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[3OAS140]]
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* [[EF0981]]
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* [[PPCDC]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [[CSPMDDC]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[MCMAT4_manual]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[DXPS]]
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== Pathways  ==
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* [[ME1]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[DPMVD]]
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** '''508''' reactions found over '''2349''' reactions in the full pathway
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* [[ME2]]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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* [[GLUDC]]
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** '''156''' reactions found over '''694''' reactions in the full pathway
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* [[TYRCBOX]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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* [[FAS100]]
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** '''218''' reactions found over '''1054''' reactions in the full pathway
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* [[ADMDC]]
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* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
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* [[PPNDH]]
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** '''14''' reactions found over '''67''' reactions in the full pathway
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* [[POX]]
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== Reconstruction information  ==
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* [[OAADC]]
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* [[orthology]]:
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* [[FAS120]]
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** [[pantograph]]:
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* [[KAS2]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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* [[OIVD3]]
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*** [[l_plantarum_wcfs1]]
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* [[KG6PDC]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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* [[OGMEACPS]]
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* [[PPND]]
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* [[ORNDC]]
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* [[FAS140]]
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* [[FAS80_L]]
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* [[KAS15]]
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* [[KAS14]]
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* [[KAS17]]
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* [[OXGDC]]
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* [[KAS13]]
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* [[3OAS100]]
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* [[3OAS80]]
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* [[3OAS160]]
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* [[PDH]]
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* [[ACHBS]]
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* [[3OAS120]]
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* [[3OAS60]]
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* [[ASP1DC]]
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* [[DAPDC]]
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* [[ACLDC]]
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* [[GLXCL]]
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* [[MCMAT7_manual]]
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* [[ALLTAMH]]
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* [[MCMAT8_manual]]
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* [[ACLS]]
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* [[3OAS180]]
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* [[3OAS181]]
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* [[OMPDC]]
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* [[DHNAOT4]]
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* [[DHNAOT7]]
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* [[SEPHCHCS]]
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== Reaction(s) of unknown directionality ==
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* [[AIRCr]]
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* [[CO2t]]
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* [[OIVD1r]]
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* [[2S6HCCi]]
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* [[CBMKr]]
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* [[HCO3E]]
 
== External links  ==
 
== External links  ==
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* EC Number : 2.5.1.10
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{{#set: common name=CO2 CO2}}
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* BioCyc : META:FPPSYN-RXN
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{{#set: consumed by=AIRC1|EX_co2}}
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* MetaNetX (MNX) Equation : MNXR99634
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{{#set: produced by=CPPPGO|GND|OIVD2|3OAS140|PPCDC|CSPMDDC|MCMAT4_manual|DXPS|ME1|DPMVD|ME2|GLUDC|TYRCBOX|FAS100|ADMDC|PPNDH|POX|OAADC|FAS120|KAS2|OIVD3|KG6PDC|OGMEACPS|PPND|ORNDC|FAS140|FAS80_L|KAS15|KAS14|KAS17|OXGDC|KAS13|3OAS100|3OAS80|3OAS160|PDH|ACHBS|3OAS120|3OAS60|ASP1DC|DAPDC|ACLDC|GLXCL|MCMAT7_manual|ALLTAMH|MCMAT8_manual|ACLS|3OAS180|3OAS181|OMPDC|DHNAOT4|DHNAOT7|SEPHCHCS}}
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* RHEA:
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{{#set: reversible reaction associated=AIRCr|CO2t|OIVD1r|2S6HCCi|CBMKr|HCO3E}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19361 19361]
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* Reactome : REACT_R-ATH-191303
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* KEGG Reaction : R02003
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Geranyltranstransferase}}
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{{#set: gene associated=EF0981}}
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{{#set: in pathway=map01100|map01130|map01110|map00900}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
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Latest revision as of 15:24, 21 March 2018

Metabolite co2

  • common name:
    • CO2 CO2
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Co2&oldid=10078"