Difference between revisions of "VALTRS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RMPA RMPA] == * direction: ** REVERSIBLE * common name: ** Rhamnulose-1-phosphate aldolase * Synony...")
 
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pi pi] == * common name: ** Phosphate * Synonym(s): == Reaction(s) known to consume the comp...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/RMPA RMPA] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/pi pi] ==
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* direction:
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** REVERSIBLE
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* common name:
 
* common name:
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** Rhamnulose-1-phosphate aldolase
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** Phosphate
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[ACPPAT141]]
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** 1.0 [[rml1p]][c] '''<=>''' 1.0 [[dhap]][c] '''+''' 1.0 [[lald__L]][c]
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* [[ACPPAT140]]
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* With common name(s):
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* [[ACPPAT161]]
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** 1.0 L-Rhamnulose 1-phosphate[c] '''<=>''' 1.0 Dihydroxyacetone phosphate[c] '''+''' 1.0 L-Lactaldehyde[c]
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* [[ACPPAT160]]
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* [[TransportSeed_pi]]
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== Genes associated with this reaction  ==
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* [[PTA2]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PIabc]]
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* [[EF0435]]
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* [[ACPPAT120]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [[ACPPAT181]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[ACPPAT180]]
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== Pathways  ==
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* [[EX_pi]]
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* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
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* [[PKETF]]
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** '''15''' reactions found over '''54''' reactions in the full pathway
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== Reaction(s) known to produce the compound ==
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* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
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* [[CRTNsyn]]
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** '''22''' reactions found over '''63''' reactions in the full pathway
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* [[NTD10]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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* [[GLNS]]
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** '''111''' reactions found over '''715''' reactions in the full pathway
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* [[PYNP1]]
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== Reconstruction information  ==
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* [[ARGabc]]
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* [[orthology]]:
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* [[GLYBabc]]
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** [[pantograph]]:
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* [[DDPA]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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* [[SELCYSS]]
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*** [[l_plantarum_wcfs1]]
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* [[PRAIS]]
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* [[METabc]]
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* [[PRFGS_1]]
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* [[G2PP]]
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* [[THRS]]
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* [[APH140]]
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* [[APH141]]
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* [[FERRICHabc]]
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* [[PRFGS]]
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* [[APG3PAT161]]
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* [[APG3PAT160]]
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* [[CA2abc1]]
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* [[CTBTCAL2]]
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* [[ASPCT]]
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* [[UAMAGS]]
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* [[DHQS]]
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* [[NTP3]]
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* [[NTP1]]
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* [[NTP5]]
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* [[PPTHppc]]
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* [[NO3abc]]
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* [[CD2abc1]]
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* [[APG3PAT181]]
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* [[APG3PAT180]]
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* [[PC]]
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* [[SPMDabc]]
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* [[ARSENBabc]]
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* [[NIabc]]
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* [[APH120]]
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* [[PTRCabc]]
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* [[PPNCL]]
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* [[PGPP_LPL]]
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* [[APG3PAT141]]
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* [[APG3PAT140]]
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* [[ZNabc]]
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* [[biomass_LPL60]]
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* [[METSRabc]]
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* [[DALTAL]]
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* [[SELNPS]]
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* [[CHORS]]
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* [[GTHS]]
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* [[CHLabc]]
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* [[ADSS]]
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* [[UAGCVT]]
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* [[MALTabc]]
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* [[UGMDDS2_LPL]]
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* [[DPMVD]]
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* [[PROTS_LPL_v60]]
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* [[G5SD]]
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* [[CRNCAL2]]
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* [[GLUCYS]]
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* [[CTPS2]]
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* [[CTPS1]]
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* [[CRNabc]]
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* [[METSabc]]
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* [[AKP1]]
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* [[Cut1]]
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* [[MI1PP]]
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* [[AHMMPS_LPL]]
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* [[UAMAS]]
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* [[UAAGLS1]]
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* [[AIRC1]]
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* [[AIRC2]]
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* [[CBPS]]
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* [[CRTNsyn_cho]]
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* [[KDOPS]]
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* [[CTBTabc]]
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* [[UDCPDP]]
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* [[NTP10]]
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* [[UGMDDS]]
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* [[GLNabc]]
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* [[FBP]]
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* [[APG3PAT120]]
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* [[TransportSeed_pi]]
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* [[CRNDCAL2]]
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* [[RNAS_LPL]]
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* [[GAPDi_nadp]]
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* [[NTD8]]
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* [[2MAHMP]]
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* [[TDP]]
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* [[PRAIS_1]]
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* [[DHFS]]
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* [[FERXAabc]]
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* [[COBALT2abcpppe]]
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* [[PIabc]]
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* [[NTD9]]
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* [[ECTOINEabc]]
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* [[CYSabc2pppe]]
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* [[ACYP_2]]
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* [[PPA]]
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* [[DARTAL]]
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* [[CHOLSabc_1]]
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* [[APH180]]
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* [[APH181]]
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* [[PPS]]
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* [[DNAS_LPL]]
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* [[PGLYCP]]
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* [[GBBTNabc]]
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* [[PURabc1]]
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* [[APH160]]
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* [[APH161]]
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* [[NTD6]]
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* [[NTD7]]
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* [[NTD4]]
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* [[NTD5]]
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* [[NTD2]]
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* [[NTD3]]
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* [[NTD1]]
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* [[MG2abc]]
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* [[METDabc]]
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* [[FTHFLi]]
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* [[METAT]]
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* [[FTHFCL]]
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* [[MGSA]]
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* [[MNabc]]
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* [[ALKP]]
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* [[UAAGDS]]
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* [[PROLBabc]]
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* [[ZN2abcpppe]]
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* [[NI2abcpppe]]
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* [[ACCOAC]]
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== Reaction(s) of unknown directionality ==
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* [[PBUTT]]
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* [[ALALAC]]
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* [[PRASCSi_copy1]]
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* [[ATPS3r]]
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* [[ASAD]]
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* [[MALP]]
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* [[3NUCLE1]]
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* [[3NUCLE3]]
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* [[3NUCLE2]]
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* [[3NUCLE4]]
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* [[PRASCSi]]
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* [[PTAr]]
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* [[PIt2r]]
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* [[PRAGSr]]
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* [[TMDPP]]
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* [[PKL]]
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* [[GAPD]]
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* [[ExchangeSeed_pi]]
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* [[OCBT_1]]
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* [[OCBT]]
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* [[THFGLUS]]
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* [[DURIPP]]
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* [[PYNP2r]]
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* [[PUNP1]]
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* [[GLNTAL]]
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* [[PUNP8]]
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* [[PUNP4]]
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* [[PNP]]
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* [[MPL]]
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* [[PUNP7]]
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* [[ALAALAr]]
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* [[PUNP2]]
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* [[PUNP3]]
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* [[PSCVT]]
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* [[PUNP6]]
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* [[PUNP5]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=Phosphate}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19689 19689]
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{{#set: consumed by=ACPPAT141|ACPPAT140|ACPPAT161|ACPPAT160|TransportSeed_pi|PTA2|PIabc|ACPPAT120|ACPPAT181|ACPPAT180|EX_pi|PKETF}}
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* BioCyc : META:RHAMNULPALDOL-RXN
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{{#set: produced by=CRTNsyn|NTD10|GLNS|PYNP1|ARGabc|GLYBabc|DDPA|SELCYSS|PRAIS|METabc|PRFGS_1|G2PP|THRS|APH140|APH141|FERRICHabc|PRFGS|APG3PAT161|APG3PAT160|CA2abc1|CTBTCAL2|ASPCT|UAMAGS|DHQS|NTP3|NTP1|NTP5|PPTHppc|NO3abc|CD2abc1|APG3PAT181|APG3PAT180|PC|SPMDabc|ARSENBabc|NIabc|APH120|PTRCabc|PPNCL|PGPP_LPL|APG3PAT141|APG3PAT140|ZNabc|biomass_LPL60|METSRabc|DALTAL|SELNPS|CHORS|GTHS|CHLabc|ADSS|UAGCVT|MALTabc|UGMDDS2_LPL|DPMVD|PROTS_LPL_v60|G5SD|CRNCAL2|GLUCYS|CTPS2|CTPS1|CRNabc|METSabc|AKP1|Cut1|MI1PP|AHMMPS_LPL|UAMAS|UAAGLS1|AIRC1|AIRC2|CBPS|CRTNsyn_cho|KDOPS|CTBTabc|UDCPDP|NTP10|UGMDDS|GLNabc|FBP|APG3PAT120|TransportSeed_pi|CRNDCAL2|RNAS_LPL|GAPDi_nadp|NTD8|2MAHMP|TDP|PRAIS_1|DHFS|FERXAabc|COBALT2abcpppe|PIabc|NTD9|ECTOINEabc|CYSabc2pppe|ACYP_2|PPA|DARTAL|CHOLSabc_1|APH180|APH181|PPS|DNAS_LPL|PGLYCP|GBBTNabc|PURabc1|APH160|APH161|NTD6|NTD7|NTD4|NTD5|NTD2|NTD3|NTD1|MG2abc|METDabc|FTHFLi|METAT|FTHFCL|MGSA|MNabc|ALKP|UAAGDS|PROLBabc|ZN2abcpppe|NI2abcpppe|ACCOAC}}
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* MetaNetX (MNX) Equation : MNXR104043
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{{#set: consumed or produced by=PBUTT|ALALAC|PRASCSi_copy1|ATPS3r|ASAD|MALP|3NUCLE1|3NUCLE3|3NUCLE2|3NUCLE4|PRASCSi|PTAr|PIt2r|PRAGSr|TMDPP|PKL|GAPD|ExchangeSeed_pi|OCBT_1|OCBT|THFGLUS|DURIPP|PYNP2r|PUNP1|GLNTAL|PUNP8|PUNP4|PNP|MPL|PUNP7|ALAALAr|PUNP2|PUNP3|PSCVT|PUNP6|PUNP5}}
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* KEGG Reaction : R02263
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* EC Number : 4.1.2.19
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Rhamnulose-1-phosphate aldolase}}
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{{#set: gene associated=EF0435}}
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{{#set: in pathway=map00040|map00051|map01120}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
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Revision as of 16:09, 10 January 2018

Metabolite pi

  • common name:
    • Phosphate
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=VALTRS&oldid=5110"