RXN-9520

Reaction RXN-9520

• direction:
  • LEFT-TO-RIGHT
• common name:
  • polyketide_synthase
• ec number:
  • EC-2.3.1.86
  • EC-2.3.1.85
  • EC-4.2.1.59
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 R-3-hydroxyhexanoyl-ACPs[c] => 1 WATER[c] + 1 Hex-2-enoyl-ACPs[c]
• With common name(s):
  • 1 a (3R)-3-hydroxyhexanoyl-[acp][c] => 1 H2O[c] + 1 a trans hex-2-enoyl-[acp][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: Tiso_gene_135
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_10876
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_13394
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_6884
  • Source: annotation-experimental_annotation
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Tiso_gene_500
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_136
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER

Pathways

• PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
  • 31 reactions found over 31 reactions in the full pathway
• PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
  • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

• Category: manual
  • Source: manual-primary_network
• Category: annotation
  • Source: annotation-experimental_annotation
    • Tool: pathwaytools
  • Source: annotation-in-silico_annotation
    • Tool: pathwaytools