RXN-9655
From metabolic_network
Contents
Reaction RXN-9655
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- ec number:
- Synonym(s):
- (3R)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase
- β-hydroxyacyl-ACP dehydrase
- HDDase
- β-hydroxyacyl-acyl carrier protein dehydratase
- FabA
- β-hydroxydecanoyl thiol ester dehydrase
- β-hydroxydecanoate dehydrase
- D-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase
Reaction Formula
- With identifiers:
- 1 Beta-hydroxydecanoyl-ACPs[c] => 1 WATER[c] + 1 Trans-D2-decenoyl-ACPs[c]
- With common name(s):
- 1 a (3R)-3-hydroxydecanoyl-[acp][c] => 1 H2O[c] + 1 a (2E)-dec-2-enoyl-[acp][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_10876
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_136
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_500
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_13394
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_135
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6884
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
Pathways
- PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
- 31 reactions found over 31 reactions in the full pathway
- PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
- 31 reactions found over 31 reactions in the full pathway
- PWY0-862, (5Z)-dodec-5-enoate biosynthesis: PWY0-862
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- "(3R)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase" cannot be used as a page name in this wiki.
- "D-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase" cannot be used as a page name in this wiki.
