RXN0-2601

Reaction RXN0-2601

• direction:
  • LEFT-TO-RIGHT
• common name:
  • formamidopyrimidine-dna_glycosylase
  • dna_glycosylase
  • dna-(apurinic_or_apyrimidinic_site)_lyase
• ec number:
  • EC-4.2.99.18
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Damaged-DNA-Pyrimidine[c] => 1 DNA-containing-a-Apyrimidinic-Sites[c]
• With common name(s):
  • 1 a damaged DNA pyrimidine[c] => 1 an apyrimidinic site in DNA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: Tiso_gene_16493
  • Source: annotation-in-silico_annotation
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Tiso_gene_19077
  • Source: annotation-in-silico_annotation
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Tiso_gene_17380
  • Source: annotation-in-silico_annotation
    • Assignment: AUTOMATED-NAME-MATCH
  • Source: annotation-experimental_annotation
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Tiso_gene_14609
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_16492
  • Source: annotation-in-silico_annotation
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Tiso_gene_1280
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
  • Source: orthology-esiliculosus
• Gene: Tiso_gene_19078
  • Source: annotation-in-silico_annotation
    • Assignment: AUTOMATED-NAME-MATCH
  • Source: orthology-esiliculosus
• Gene: Tiso_gene_11590
  • Source: orthology-esiliculosus
• Gene: Tiso_gene_6558
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER

Reconstruction information

• Category: orthology
  • Source: orthology-esiliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-in-silico_annotation
    • Tool: pathwaytools
  • Source: annotation-experimental_annotation
    • Tool: pathwaytools