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The query [[Category:Reaction]] [[Reconstruction category::Manual]] was answered by the SMWSQLStore3 in 0.0557 seconds.

Results 51 – 100    (Previous 50 | Next 50)   (20 | 50 | 100 | 250 | 500)   (JSON | CSV | RSS | RDF)
 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceGene associatedIn pathway
ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXNAspartate-semialdehyde dehydrogenaseEC-1.2.1.11Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 18603HOMOSERSYN-PWY
PWY-7153
DAPLYSINESYN-PWY
PWY-2942
PWY-2941
PWY-6559
PWY-6562
PWY-5097
P101-PWY
ASPARTATEKIN-RXNBifunctional aspartokinase homoserine dehydrogenase
Aspartokinase
Homoserine dehydrogenase		EC-2.7.2.4Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 16097
Tiso gene 4345
Tiso gene 13809
Tiso gene 17057		HOMOSERSYN-PWY
PWY-7153
DAPLYSINESYN-PWY
PWY-2942
PWY-2941
PWY-6559
PWY-6562
PWY-5097
P101-PWY
ASPCARBTRANS-RXNProtein pyr1-3EC-2.1.3.2Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 13527PWY-7790
PWY-7791
PWY-5686
ATPPHOSPHORIBOSYLTRANS-RXNEC-2.4.2.17ManualManual-primary networkHISTSYN-PWY
ATPSYN-RXNV-type proton atpase
ORF
Vacuolar h+- sector c
V-type proton atpase catalytic subunit a
Vacuolar h+-atpase v0 subunits a
Atp synthase gamma chloroplastic
Atp synthase gamma subunit
Atp synthase subunit mitochondrial
Ycf35
Atp synthase delta mitochondrial
V-type proton atpase subunit h
V-type protonatpasesubunitd1		EC-3.6.3.14Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Manual-primary network
Annotation-in-silico annotation
Orthology-esiliculosus		Tiso gene 11754
Tiso gene 9460
Tiso gene 12618
Tiso gene 18105
Tiso gene 11192
Tiso gene 5307
Tiso gene 15850
Tiso gene 1366
Tiso gene 7213
Tiso gene 10981
Tiso gene 2798
Tiso gene 1365
Tiso gene 17383
Tiso gene 7215
Tiso gene 11753
Tiso gene 11155
Tiso gene 6012
Tiso gene 6592		PWY-7219
BRANCHED-CHAINAMINOTRANSFERILEU-RXNBranched-chain amino acid aminotransferaseEC-2.6.1.42Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 14984
Tiso gene 17748
Tiso gene 18403		ILEUSYN-PWY
ILEUDEG-PWY
PWY-5108
PWY-5103
PWY-5101
PWY-5078
PWY-5104
BRANCHED-CHAINAMINOTRANSFERLEU-RXNBranched-chain amino acid aminotransferaseEC-2.6.1.6
EC-2.6.1.42		Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-in-silico annotation
Manual-primary network
Annotation-experimental annotation
Orthology-synechocystis
Orthology-esiliculosus		Tiso gene 18403
Tiso gene 14984		PWY-7767
LEU-DEG2-PWY
LEUSYN-PWY
PWY-5076
BRANCHED-CHAINAMINOTRANSFERVAL-RXNBranched-chain amino acid aminotransferaseEC-2.6.1.42Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Manual-primary network
Annotation-in-silico annotation
Orthology-synechocystis
Orthology-esiliculosus		Tiso gene 18403
Tiso gene 14984		VALSYN-PWY
VALDEG-PWY
ALANINE-VALINESYN-PWY
PWY-5057
CARBPSYN-RXNCarbamoyl phosphate synthetaseEC-6.3.5.5Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Manual-primary network
Annotation-in-silico annotation
Orthology-esiliculosus		Tiso gene 4976
Tiso gene 4975
Tiso gene 4685		ARGSYN-PWY
PWY-5154
PWY-7790
ARGSYNBSUB-PWY
PWY-7400
PWY-7791
PWY-5686
CDPKIN-RXNORF
Adenylate kinase domain-containing protein 1
Nucleoside diphosphate kinase		EC-2.7.4.6Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network		Tiso gene 16529
Tiso gene 17271
Tiso gene 17272
Tiso gene 195
Tiso gene 9290
Tiso gene 18224		PWY-7205
CDPREDUCT-RXNRibonucleoside-diphosphate reductaseEC-1.17.4.1Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network		Tiso gene 10617
Tiso gene 9916
Tiso gene 10138
Tiso gene 9915		PWY-7210
PWY-7198
PWY-6545
PWY0-166
PWY-7184
CHORISMATE-SYNTHASE-RXNChorismate synthaseEC-4.2.3.5Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 9630PWY-6163
CHORISMATEMUT-RXNBifunctional chorismate mutase prephenate dehydrataseEC-5.4.99.5Orthology
Manual
Annotation		Pantograph
Pathwaytools		Orthology-creinhardtii
Orthology-athaliana
Annotation-in-silico annotation
Manual-primary network
Orthology-esiliculosus		Tiso gene 5940PHESYN
PWY-6120
PWY-3462
PWY-3461
PWY-7626
TYRSYN
PWY-6627
CITSYN-RXNCitrate synthase
Condensing enzyme
Citrate synthesis		EC-2.3.3.16
EC-2.3.3.1		Manual
Annotation		PathwaytoolsAnnotation-in-silico annotation
Manual-primary network
Annotation-experimental annotation		Tiso gene 9602
Tiso gene 9601
Tiso gene 18030
Tiso gene 9603		PWY-5913
PWY-7124
PWY-6969
PWY66-398
REDCITCYC
P105-PWY
GLYOXYLATE-BYPASS
FERMENTATION-PWY
PWY-6728
PWY-6549
PWY-7254
PWY-5690
PWY-5750
TCA
CTPSYN-RXNEC-6.3.4.2Manual
Annotation		PathwaytoolsAnnotation-in-silico annotation
Manual-primary network
Annotation-experimental annotation		PWY-7185
PWY-7176
PWY-7177
CYSTATHIONINE-BETA-LYASE-RXNCYSTATHIONINE-BETA-LYASE-RXNManualManual-primary network
CYTOCHROME-C-OXIDASE-RXNORFEC-1.9.3.1Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Manual-primary network
Annotation-in-silico annotation
Orthology-esiliculosus		Tiso gene 18580
Tiso gene 7948
Tiso gene 15682
Tiso gene 18053		PWY-3781
PWY-7279
PWY-4521
CYTOCHROME-C-PEROXIDASE-RXNAscorbate peroxidase
Cytochrome-c peroxidase
Peroxidase
ORF		EC-1.11.1.5Manual
Annotation		PathwaytoolsAnnotation-experimental annotation
Manual-primary network
Annotation-in-silico annotation		Tiso gene 11607
Tiso gene 4992
Tiso gene 4990
Tiso gene 5435
Tiso gene 19683
Tiso gene 11606
DADPKIN-RXNORF
Adenylate kinase domain-containing protein 1
Nucleoside diphosphate kinase		EC-2.7.4.6Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network		Tiso gene 17271
Tiso gene 9290
Tiso gene 18224
Tiso gene 16529
Tiso gene 17272
Tiso gene 195		PWY-7220
PWY-7224
PWY-7227
DAHPSYN-RXNPhospho-2-dehydro-3-deoxyheptonate phe-sensitive
3-deoxy-7-phosphoheptulonate synthase
ORF		EC-2.5.1.54Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Manual-primary network
Orthology-creinhardtii		Tiso gene 7372
Tiso gene 18937
Tiso gene 18975
Tiso gene 8935
Tiso gene 8934		PWY-6164
DCDPKIN-RXNORF
Nucleoside diphosphate kinase
Adenylate kinase domain-containing protein 1		EC-2.7.4.6Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network		Tiso gene 16529
Tiso gene 9290
Tiso gene 17271
Tiso gene 195
Tiso gene 17272
Tiso gene 18224		PWY-7210
PWY-7198
PWY-7184
PWY-7197
PWY0-166
PWY-6545
DGDPKIN-RXNORF
Adenylate kinase domain-containing protein 1
Nucleoside diphosphate kinase		EC-2.7.4.6Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 195
Tiso gene 17272
Tiso gene 17271
Tiso gene 16529
Tiso gene 18224
Tiso gene 9290		PWY-7222
PWY-7224
PWY-7226
DIAMINOPIMDECARB-RXNDiaminopimelate decarboxylaseEC-4.1.1.20Orthology
Manual
Annotation		Pantograph
Pathwaytools		Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 12041
Tiso gene 10737		PWY-5097
PWY-2942
DAPLYSINESYN-PWY
PWY-2941
DIAMINOPIMEPIM-RXNEC-5.1.1.7ManualManual-primary networkPWY-5097
DAPLYSINESYN-PWY
PWY-2941
DIHYDRODIPICSYN-RXNDihydrodipicolinate synthase
Dihydropicolinate synthetase
Dihydrodipicolinic acid synthase		EC-4.3.3.7Orthology
Manual
Annotation		Pantograph
Pathwaytools		Manual-primary network
Annotation-in-silico annotation
Orthology-esiliculosus		Tiso gene 14829PWY-5097
PWY-2942
DAPLYSINESYN-PWY
PWY-2941
DIHYDROFOLATEREDUCT-RXNEC-1.5.1.3ManualManual-primary network1CMET2-PWY
PWY-6614
PWY-3841
DIHYDROOROT-RXNORFEC-3.5.2.3Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-in-silico annotation
Manual-primary network
Orthology-creinhardtii
Orthology-synechocystis
Annotation-experimental annotation		Tiso gene 15379PWY-7790
PWY-7791
PWY-5686
DIHYDROXYISOVALDEHYDRAT-RXNEC-4.2.1.9Orthology
Manual
Annotation		Pantograph
Pathwaytools		Manual-primary network
Annotation-experimental annotation
Orthology-athaliana
Orthology-esiliculosus		Tiso gene 1563VALSYN-PWY
PWY-7111
DIHYDROXYMETVALDEHYDRAT-RXN2,3-Dihydroxy-3-methylvalerate dehydrataseEC-4.2.1.9Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 1563PWY-5103
ILEUSYN-PWY
PWY-5101
PWY-5104
DTDPKIN-RXNORF
Nucleoside diphosphate kinase
Adenylate kinase domain-containing protein 1		EC-2.7.4.6Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network		Tiso gene 9290
Tiso gene 17271
Tiso gene 18224
Tiso gene 17272
Tiso gene 16529
Tiso gene 195		PWY-7210
PWY-7198
PWY-7184
PWY-7187
PWY-7197
PWY0-166
PWY-6545
DTMPKI-RXNThymidylate kinaseEC-2.7.4.12
EC-2.7.4.13
EC-2.7.4.9		Manual
Annotation		PathwaytoolsAnnotation-experimental annotation
Manual-primary network
Annotation-in-silico annotation		Tiso gene 3755PWY-7210
PWY-7198
PWY-7184
PWY-7187
PWY-7197
PWY0-166
PWY-6545
DUDPKIN-RXNORF
Adenylate kinase domain-containing protein 1
Nucleoside diphosphate kinase		EC-2.7.4.6Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network		Tiso gene 17271
Tiso gene 18224
Tiso gene 9290
Tiso gene 16529
Tiso gene 17272
Tiso gene 195		PWY-7184
PWY-6545
PWY0-166
DUTP-PYROP-RXNInosine triphosphateEC-3.6.1.23
EC-3.6.1.9		Orthology
Manual
Annotation		Pantograph
Pathwaytools		Manual-primary network
Annotation-in-silico annotation
Orthology-athaliana		Tiso gene 18793
Tiso gene 18792		PWY-7206
PWY-7184
PWY-7187
PWY-6545
PWY0-166
DXPREDISOM-RXN1-deoxy-d-xylulose 5-phosphate reductoisomeraseEC-1.1.1.267Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 15169NONMEVIPP-PWY
PWY-7560
DXS-RXN1-deoxy-d-xylulose 5-phosphate chloroplastEC-2.2.1.7Orthology
Manual
Annotation		Pantograph
Pathwaytools		Annotation-experimental annotation
Orthology-esiliculosus
Annotation-in-silico annotation
Orthology-athaliana
Orthology-synechocystis
Manual-primary network
Orthology-creinhardtii		Tiso gene 17311NONMEVIPP-PWY
PWY-6891
PWY-6892
PYRIDOXSYN-PWY
PWY-7560
ExchangeDeadEnd Biomass-CompositionsManualManual-export biomass rxn
ExchangeSeed BR-ManualManual-import from medium
ExchangeSeed CA+2ManualManual-import from medium
ExchangeSeed CARBON-DIOXIDEManualManual-import from medium
ExchangeSeed CL-ManualManual-import from medium
ExchangeSeed CO+2ManualManual-import from medium
ExchangeSeed CPD-3ManualManual-import from medium
ExchangeSeed CPD-315ManualManual-import from medium
ExchangeSeed CU+ManualManual-import from medium
ExchangeSeed CU+2ManualManual-import from medium
ExchangeSeed F-ManualManual-import from medium
ExchangeSeed FE+3ManualManual-import from medium
ExchangeSeed IODINE-MOLECULEManualManual-import from medium
ExchangeSeed K+ManualManual-import from medium
ExchangeSeed LI+ManualManual-import from medium
Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php/Special:Ask/-5B-5BCategory:Reaction-5D-5D-20-5B-5BReconstruction-20category::Manual-5D-5D/-3FCommon-20name/-3FEc-20number/-3FReconstruction-20category/-3FReconstruction-20tool/-3FReconstruction-20source/-3FGene-20associated/-3FIn-20pathway/mainlabel%3D/limit%3D50/offset%3D50/format%3Dtable"