Semantic search

	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Gene associated	In pathway
ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN	EC-1.2.1.11	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 18603	HOMOSERSYN-PWY PWY-7153 DAPLYSINESYN-PWY PWY-2942 PWY-2941 PWY-6559 PWY-6562 PWY-5097 P101-PWY
ASPARTATEKIN-RXN	EC-2.7.2.4	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 16097 Tiso gene 4345 Tiso gene 13809 Tiso gene 17057	HOMOSERSYN-PWY PWY-7153 DAPLYSINESYN-PWY PWY-2942 PWY-2941 PWY-6559 PWY-6562 PWY-5097 P101-PWY
ASPCARBTRANS-RXN	EC-2.1.3.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 13527	PWY-7790 PWY-7791 PWY-5686
ATPPHOSPHORIBOSYLTRANS-RXN	EC-2.4.2.17	Manual		Manual-primary network		HISTSYN-PWY
ATPSYN-RXN	EC-3.6.3.14	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 11754 Tiso gene 9460 Tiso gene 12618 Tiso gene 18105 Tiso gene 11192 Tiso gene 5307 Tiso gene 15850 Tiso gene 1366 Tiso gene 7213 Tiso gene 10981 Tiso gene 2798 Tiso gene 1365 Tiso gene 17383 Tiso gene 7215 Tiso gene 11753 Tiso gene 11155 Tiso gene 6012 Tiso gene 6592	PWY-7219
BRANCHED-CHAINAMINOTRANSFERILEU-RXN	EC-2.6.1.42	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 14984 Tiso gene 17748 Tiso gene 18403	ILEUSYN-PWY ILEUDEG-PWY PWY-5108 PWY-5103 PWY-5101 PWY-5078 PWY-5104
BRANCHED-CHAINAMINOTRANSFERLEU-RXN	EC-2.6.1.6 EC-2.6.1.42	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 18403 Tiso gene 14984	PWY-7767 LEU-DEG2-PWY LEUSYN-PWY PWY-5076
BRANCHED-CHAINAMINOTRANSFERVAL-RXN	EC-2.6.1.42	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 18403 Tiso gene 14984	VALSYN-PWY VALDEG-PWY ALANINE-VALINESYN-PWY PWY-5057
CARBPSYN-RXN	EC-6.3.5.5	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 4976 Tiso gene 4975 Tiso gene 4685	ARGSYN-PWY PWY-5154 PWY-7790 ARGSYNBSUB-PWY PWY-7400 PWY-7791 PWY-5686
CDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 16529 Tiso gene 17271 Tiso gene 17272 Tiso gene 195 Tiso gene 9290 Tiso gene 18224	PWY-7205
CDPREDUCT-RXN	EC-1.17.4.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 10617 Tiso gene 9916 Tiso gene 10138 Tiso gene 9915	PWY-7210 PWY-7198 PWY-6545 PWY0-166 PWY-7184
CHORISMATE-SYNTHASE-RXN	EC-4.2.3.5	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 9630	PWY-6163
CHORISMATEMUT-RXN	EC-5.4.99.5	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-esiliculosus	Tiso gene 5940	PHESYN PWY-6120 PWY-3462 PWY-3461 PWY-7626 TYRSYN PWY-6627
CITSYN-RXN	EC-2.3.3.16 EC-2.3.3.1	Manual Annotation	Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation	Tiso gene 9602 Tiso gene 9601 Tiso gene 18030 Tiso gene 9603	PWY-5913 PWY-7124 PWY-6969 PWY66-398 REDCITCYC P105-PWY GLYOXYLATE-BYPASS FERMENTATION-PWY PWY-6728 PWY-6549 PWY-7254 PWY-5690 PWY-5750 TCA
CTPSYN-RXN	EC-6.3.4.2	Manual Annotation	Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation		PWY-7185 PWY-7176 PWY-7177
CYSTATHIONINE-BETA-LYASE-RXN		Manual		Manual-primary network
CYTOCHROME-C-OXIDASE-RXN	EC-1.9.3.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 18580 Tiso gene 7948 Tiso gene 15682 Tiso gene 18053	PWY-3781 PWY-7279 PWY-4521
CYTOCHROME-C-PEROXIDASE-RXN	EC-1.11.1.5	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation	Tiso gene 11607 Tiso gene 4992 Tiso gene 4990 Tiso gene 5435 Tiso gene 19683 Tiso gene 11606
DADPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 17271 Tiso gene 9290 Tiso gene 18224 Tiso gene 16529 Tiso gene 17272 Tiso gene 195	PWY-7220 PWY-7224 PWY-7227
DAHPSYN-RXN	EC-2.5.1.54	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Manual-primary network Orthology-creinhardtii	Tiso gene 7372 Tiso gene 18937 Tiso gene 18975 Tiso gene 8935 Tiso gene 8934	PWY-6164
DCDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 16529 Tiso gene 9290 Tiso gene 17271 Tiso gene 195 Tiso gene 17272 Tiso gene 18224	PWY-7210 PWY-7198 PWY-7184 PWY-7197 PWY0-166 PWY-6545
DGDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 195 Tiso gene 17272 Tiso gene 17271 Tiso gene 16529 Tiso gene 18224 Tiso gene 9290	PWY-7222 PWY-7224 PWY-7226
DIAMINOPIMDECARB-RXN	EC-4.1.1.20	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 12041 Tiso gene 10737	PWY-5097 PWY-2942 DAPLYSINESYN-PWY PWY-2941
DIAMINOPIMEPIM-RXN	EC-5.1.1.7	Manual		Manual-primary network		PWY-5097 DAPLYSINESYN-PWY PWY-2941
DIHYDRODIPICSYN-RXN	EC-4.3.3.7	Orthology Manual Annotation	Pantograph Pathwaytools	Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 14829	PWY-5097 PWY-2942 DAPLYSINESYN-PWY PWY-2941
DIHYDROFOLATEREDUCT-RXN	EC-1.5.1.3	Manual		Manual-primary network		1CMET2-PWY PWY-6614 PWY-3841
DIHYDROOROT-RXN	EC-3.5.2.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Manual-primary network Orthology-creinhardtii Orthology-synechocystis Annotation-experimental annotation	Tiso gene 15379	PWY-7790 PWY-7791 PWY-5686
DIHYDROXYISOVALDEHYDRAT-RXN	EC-4.2.1.9	Orthology Manual Annotation	Pantograph Pathwaytools	Manual-primary network Annotation-experimental annotation Orthology-athaliana Orthology-esiliculosus	Tiso gene 1563	VALSYN-PWY PWY-7111
DIHYDROXYMETVALDEHYDRAT-RXN	EC-4.2.1.9	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 1563	PWY-5103 ILEUSYN-PWY PWY-5101 PWY-5104
DTDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 9290 Tiso gene 17271 Tiso gene 18224 Tiso gene 17272 Tiso gene 16529 Tiso gene 195	PWY-7210 PWY-7198 PWY-7184 PWY-7187 PWY-7197 PWY0-166 PWY-6545
DTMPKI-RXN	EC-2.7.4.12 EC-2.7.4.13 EC-2.7.4.9	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation	Tiso gene 3755	PWY-7210 PWY-7198 PWY-7184 PWY-7187 PWY-7197 PWY0-166 PWY-6545
DUDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 17271 Tiso gene 18224 Tiso gene 9290 Tiso gene 16529 Tiso gene 17272 Tiso gene 195	PWY-7184 PWY-6545 PWY0-166
DUTP-PYROP-RXN	EC-3.6.1.23 EC-3.6.1.9	Orthology Manual Annotation	Pantograph Pathwaytools	Manual-primary network Annotation-in-silico annotation Orthology-athaliana	Tiso gene 18793 Tiso gene 18792	PWY-7206 PWY-7184 PWY-7187 PWY-6545 PWY0-166
DXPREDISOM-RXN	EC-1.1.1.267	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 15169	NONMEVIPP-PWY PWY-7560
DXS-RXN	EC-2.2.1.7	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 17311	NONMEVIPP-PWY PWY-6891 PWY-6892 PYRIDOXSYN-PWY PWY-7560
F16ALDOLASE-RXN	EC-4.1.2.13	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Manual-primary network Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 14568 Tiso gene 9118 Tiso gene 9119 Tiso gene 9179 Tiso gene 12272 Tiso gene 65	PWY-1042 P341-PWY GLUCONEO-PWY GLYCOLYSIS SUCSYN-PWY PWY-7385 ANAGLYCOLYSIS-PWY CALVIN-PWY PWY-1861 PWY-6142 PWY-5484 P185-PWY PWY66-399
F16BDEPHOS-RXN	EC-3.1.3.11	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Manual-primary network Orthology-creinhardtii	Tiso gene 4904 Tiso gene 3483 Tiso gene 4905 Tiso gene 15398 Tiso gene 9435 Tiso gene 8226 Tiso gene 16502	GLUCONEO-PWY SUCSYN-PWY GLYCOLYSIS CALVIN-PWY PWY-5484 P185-PWY PWY66-399
FARNESYLTRANSTRANSFERASE-RXN	EC-2.5.1.29	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 16284 Tiso gene 7305	PWY-7736 PWY-7492 PWY-6659 PWY-6691 PWY-5120 PWY-7720 PWY-7721 PWY-7517
FERREDOXIN--NITRITE-REDUCTASE-RXN	EC-1.7.7.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 7919	PWY-381 PWY490-3
FGAMSYN-RXN	EC-6.3.5.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-athaliana	Tiso gene 5865	PWY-6121 PWY-6122 PWY-6277
FLAVONADPREDUCT-RXN	EC-1.19.1.a	Manual		Manual-primary network
FORMATETHFLIG-RXN	EC-6.3.4.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 7582 Tiso gene 432	PWY-2201 PWY-1722 PWY-2161 PWY-3841 CODH-PWY
FPPSYN-RXN	EC-2.5.1.10	Orthology Manual	Pantograph	Orthology-athaliana Manual-primary network Orthology-esiliculosus Orthology-synechocystis	Tiso gene 16284	PWY-7736 PWY-6859 PWY-5123 PWY-7721 PWY-7102
FUMHYDR-RXN	EC-4.2.1.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Manual-primary network Orthology-creinhardtii	Tiso gene 3691 Tiso gene 6720	PWY-561 PWY-5913 P42-PWY PWY-5690 PWY-7384 PWY-5392 P23-PWY P105-PWY FERMENTATION-PWY PWY-6728 REDCITCYC PWY-7254 P108-PWY TCA PWY66-398 PWY-6969
GAPOXNPHOSPHN-RXN	EC-1.2.1.12	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 6766 Tiso gene 3344 Tiso gene 10646 Tiso gene 235 Tiso gene 20000	PWY-1042 PWY66-399 GLUCONEO-PWY SUCSYN-PWY PWY-6901 P124-PWY GLYCOLYSIS ANAGLYCOLYSIS-PWY PWY-5484 P185-PWY P122-PWY PWY-7003
GART-RXN	EC-2.1.2.2	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation		PWY-6121 PWY-6613
GCVP-RXN	EC-1.4.4.2	Orthology Manual	Pantograph	Manual-primary network Orthology-esiliculosus	Tiso gene 17287 Tiso gene 428	GLYCINE-SYN2-PWY GLYCLEAV-PWY
GCVT-RXN	EC-2.1.2.10	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 15700 Tiso gene 14788 Tiso gene 17287 Tiso gene 6882 Tiso gene 2717 Tiso gene 19389	GLYCLEAV-PWY
GDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 17272 Tiso gene 17271 Tiso gene 18224 Tiso gene 195 Tiso gene 9290 Tiso gene 16529	PWY-7221 PPGPPMET-PWY
GDPREDUCT-RXN	EC-1.17.4.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 9916 Tiso gene 10617 Tiso gene 9915 Tiso gene 10138	PWY-7222 PWY-7226

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