Difference between revisions of "Tiso gene 9355"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE-RACEMASE-RXN PROLINE-RACEMASE-RXN] == * direction: ** REVERSIBLE * common name: ** proline_...")
 
(Created page with "Category:Gene == Gene Tiso_gene_17539 == * left end position: ** 341 * transcription direction: ** NEGATIVE * right end position: ** 3556 * centisome position: ** 9.40171...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE-RACEMASE-RXN PROLINE-RACEMASE-RXN] ==
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== Gene Tiso_gene_17539 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 341
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* common name:
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* transcription direction:
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** proline_racemase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/5.1.1.4 EC-5.1.1.4]
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** 3556
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* centisome position:
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** 9.40171   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PYRUVDEH-RXN]]
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** 1 [[PRO]][c] '''<=>''' 1 [[D-PROLINE]][c]
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** [[pantograph]]-[[esiliculosus]]
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* With common name(s):
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* [[RXN-12508]]
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** 1 L-proline[c] '''<=>''' 1 D-proline[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12583]]
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* [[Tiso_gene_13061]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[RXN0-1134]]
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** experimental_annotation
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** '''4''' reactions found over '''9''' reactions in the full pathway
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***ec-number
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== Reconstruction information  ==
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** [[pantograph]]-[[esiliculosus]]
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* [[annotation]]:
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== Pathways associated ==
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** [[pathwaytools]]:
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* [[PYRUVDEHYD-PWY]]
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*** [[in-silico_annotation]]
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* [[PWY-7218]]
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* [[PWY-7384]]
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* [[PWY-6886]]
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* [[PWY-5537]]
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* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
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* [[PWY-5482]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=341}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10680 10680]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3556}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01255 R01255]
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{{#set: centisome position=9.40171    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=PYRUVDEH-RXN|RXN-12508|RXN-12583|RXN0-1134}}
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{{#set: common name=proline_racemase}}
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{{#set: pathway associated=PYRUVDEHYD-PWY|PWY-7218|PWY-7384|PWY-6886|PWY-5537|GLYCOLYSIS-TCA-GLYOX-BYPASS|PWY-5482}}
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{{#set: ec number=EC-5.1.1.4}}
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{{#set: gene associated=Tiso_gene_13061}}
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{{#set: in pathway=PWY-6344}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 17:57, 10 January 2018

Gene Tiso_gene_17539

  • left end position:
    • 341
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3556
  • centisome position:
    • 9.40171
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9355&oldid=15379"