Difference between revisions of "TRANS-RXN-77"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLENE-THF-GLU-N METHYLENE-THF-GLU-N] == * common name: ** a 5,10-methylene-tetrahydrofolate...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLENE-THF-GLU-N METHYLENE-THF-GLU-N] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] ==
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* taxonomic range:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3035 TAX-3035]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
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** a 5,10-methylene-tetrahydrofolate
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** TCA cycle IV (2-oxoglutarate decarboxylase)
 
* Synonym(s):
 
* Synonym(s):
−
** methylene-H4PteGlu(n)
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** citric acid cycle
−
** methylene-THF(glu)n
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** tricarboxylic acid cycle
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** methylene-H4PteGlun
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** Szent-Gyorgyi-Krebs cycle
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** methylene-tetrahydropteroylpolyglutamates
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** Krebs cycle
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[1.5.1.20-RXN]]
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'''9''' reactions found over '''11''' reactions in the full pathway
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* [[RXN-5061]]
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* [[ACONITATEDEHYDR-RXN]]
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* [[RXN0-2921]]
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** 1 associated gene(s):
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* [[THYMIDYLATESYN-RXN]]
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*** [[Tiso_gene_13007]]
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== Reaction(s) known to produce the compound ==
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** 3 reconstruction source(s) associated:
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* [[RXN-2881]]
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*** [[annotation-experimental_annotation]]
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* [[RXN0-2921]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) of unknown directionality ==
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*** [[orthology-synechocystis]]
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* [[GCVT-RXN]]
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* [[ACONITATEHYDR-RXN]]
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* [[GLYOHMETRANS-RXN]]
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** 1 associated gene(s):
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* [[3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN]]
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*** [[Tiso_gene_13007]]
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* [[METHYLENETHFDEHYDROG-NADP-RXN]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[CITSYN-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18030]]
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*** [[Tiso_gene_9601]]
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*** [[Tiso_gene_9603]]
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*** [[Tiso_gene_9602]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6720]]
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*** [[Tiso_gene_3691]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ISOCIT-CLEAV-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14008]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ISOCITDEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18262]]
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*** [[Tiso_gene_10809]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1990]]
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*** [[Tiso_gene_2323]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[MALSYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14377]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SUCCSEMIALDDEHYDROG-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_6952]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-synechocystis]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7774 RXN-7774]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a 5,10-methylene-tetrahydrofolate}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: common name=methylene-H4PteGlu(n)|methylene-THF(glu)n|methylene-H4PteGlun|methylene-tetrahydropteroylpolyglutamates}}
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{{#set: taxonomic range=TAX-3035}}
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{{#set: consumed by=1.5.1.20-RXN|RXN-5061|RXN0-2921|THYMIDYLATESYN-RXN}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: produced by=RXN-2881|RXN0-2921}}
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{{#set: taxonomic range=TAX-201174}}
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{{#set: consumed or produced by=GCVT-RXN|GLYOHMETRANS-RXN|3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN|METHYLENETHFDEHYDROG-NADP-RXN}}
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{{#set: common name=TCA cycle IV (2-oxoglutarate decarboxylase)}}
 +
{{#set: common name=citric acid cycle|tricarboxylic acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
 +
{{#set: reaction found=9}}
 +
{{#set: total reaction=11}}
 +
{{#set: completion rate=82.0}}

Revision as of 18:55, 18 March 2018

Pathway P105-PWY

  • taxonomic range:
  • common name:
    • TCA cycle IV (2-oxoglutarate decarboxylase)
  • Synonym(s):
    • citric acid cycle
    • tricarboxylic acid cycle
    • Szent-Gyorgyi-Krebs cycle
    • Krebs cycle

Reaction(s) found

9 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRANS-RXN-77&oldid=20701"