Difference between revisions of "Tiso gene 4457"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOKINASE-RXN FRUCTOKINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hexokinase *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOKINASE-RXN FRUCTOKINASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** hexokinase
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** pyruvate decarboxylation to acetyl CoA
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.4 EC-2.7.1.4]
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* Synonym(s):
 
* Synonym(s):
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** pyruvate dehydrogenase complex
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** acetyl-CoA biosynthesis I (pyruvate dehydrogenase complex)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[BETA-D-FRUCTOSE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
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* [[RXN0-1132]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 ATP[c] '''+''' 1 β-D-fructofuranose[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 β-D-fructofuranose 6-phosphate[c]
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*** [[Tiso_gene_9330]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_17974]]
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* [[RXN0-1133]]
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** [[pantograph]]-[[athaliana]]
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** 2 associated gene(s):
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_19780]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_2693]]
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* [[Tiso_gene_3107]]
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** 3 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-esiliculosus]]
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***AUTOMATED-NAME-MATCH
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* [[RXN0-1134]]
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** [[pantograph]]-[[athaliana]]
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** 5 associated gene(s):
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_2693]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_7519]]
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* [[Tiso_gene_1303]]
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*** [[Tiso_gene_6983]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_17539]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_2515]]
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== Pathways  ==
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** 4 reconstruction source(s) associated:
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* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384]
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*** [[annotation-experimental_annotation]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[manual-primary_network]]
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* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
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*** [[annotation-in-silico_annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[SUCUTIL-PWY]], sucrose degradation I (sucrose phosphotransferase): [http://metacyc.org/META/NEW-IMAGE?object=SUCUTIL-PWY SUCUTIL-PWY]
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== Reaction(s) not found ==
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[SUCROSEUTIL2-PWY]], sucrose degradation VII (sucrose 3-dehydrogenase): [http://metacyc.org/META/NEW-IMAGE?object=SUCROSEUTIL2-PWY SUCROSEUTIL2-PWY]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4101]], D-sorbitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6531]], mannitol cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6531 PWY-6531]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16125 16125]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00760 R00760]
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{{#set: taxonomic range=TAX-2759}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q09124 Q09124]
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{{#set: common name=pyruvate decarboxylation to acetyl CoA}}
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** [http://www.uniprot.org/uniprot/P24261 P24261]
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{{#set: common name=pyruvate dehydrogenase complex|acetyl-CoA biosynthesis I (pyruvate dehydrogenase complex)}}
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** [http://www.uniprot.org/uniprot/Q03417 Q03417]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/Q9V0T7 Q9V0T7]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/Q9CFI9 Q9CFI9]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P22824 P22824]
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** [http://www.uniprot.org/uniprot/P26420 P26420]
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** [http://www.uniprot.org/uniprot/P26984 P26984]
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** [http://www.uniprot.org/uniprot/P37829 P37829]
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** [http://www.uniprot.org/uniprot/P43468 P43468]
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** [http://www.uniprot.org/uniprot/P73521 P73521]
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** [http://www.uniprot.org/uniprot/O82616 O82616]
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** [http://www.uniprot.org/uniprot/O04897 O04897]
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** [http://www.uniprot.org/uniprot/Q42645 Q42645]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=hexokinase}}
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{{#set: ec number=EC-2.7.1.4}}
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{{#set: gene associated=Tiso_gene_17974|Tiso_gene_3107|Tiso_gene_1303}}
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{{#set: in pathway=PWY-5384|PWY-621|SUCUTIL-PWY|SUCROSEUTIL2-PWY|PWY-4101|PWY-6531|PWY-3801|P122-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:12, 21 March 2018

Pathway PYRUVDEHYD-PWY

  • taxonomic range:
  • common name:
    • pyruvate decarboxylation to acetyl CoA
  • Synonym(s):
    • pyruvate dehydrogenase complex
    • acetyl-CoA biosynthesis I (pyruvate dehydrogenase complex)

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links





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