Difference between revisions of "PHOSNACMURPENTATRANS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.2-RXN 3.4.11.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** aminopeptidase_n ** m...")
(Created page with "Category:Gene == Gene Tiso_gene_3260 == * right end position: ** 11548 * transcription direction: ** NEGATIVE * left end position: ** 10034 * centisome position: ** 58.520...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.2-RXN 3.4.11.2-RXN] ==
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== Gene Tiso_gene_3260 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11548
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* common name:
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* transcription direction:
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** aminopeptidase_n
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** NEGATIVE
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** membrane_aminopeptidase_i
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* left end position:
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* ec number:
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** 10034
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** [http://enzyme.expasy.org/EC/3.4.11.2 EC-3.4.11.2]
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* centisome position:
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** 58.520935   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.2.1.25-RXN]]
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** 1 [[POLYPEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[POLYPEPTIDE]][c] '''+''' 1 [[L-Amino-Acids]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a polypeptide[c] '''+''' 1 H2O[c] '''=>''' 1 a polypeptide[c] '''+''' 1 an L-amino acid[c]
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* Reaction: [[1.2.4.4-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_16906]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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* Reaction: [[2.3.1.168-RXN]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_860]]
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*** Assignment: automated-name-match
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** IN-SILICO_ANNOTATION
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* Reaction: [[2KETO-3METHYLVALERATE-RXN]]
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-creinhardtii]]
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[KETOISOCAPROATE-RXN]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* Category: [[orthology]]
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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* Reaction: [[METHYLVALERATE-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-7719]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5046]]
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* [[VALDEG-PWY]]
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* [[ILEUDEG-PWY]]
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* [[PWY-5108]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: right end position=11548}}
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** [http://www.uniprot.org/uniprot/P15144 P15144]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/P15684 P15684]
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{{#set: left end position=10034}}
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** [http://www.uniprot.org/uniprot/P15145 P15145]
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{{#set: centisome position=58.520935    }}
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** [http://www.uniprot.org/uniprot/P04825 P04825]
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{{#set: reaction associated=1.2.1.25-RXN|1.2.4.4-RXN|2.3.1.168-RXN|2KETO-3METHYLVALERATE-RXN|KETOISOCAPROATE-RXN|METHYLVALERATE-RXN|RXN-7719}}
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** [http://www.uniprot.org/uniprot/P45274 P45274]
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{{#set: pathway associated=PWY-5046|VALDEG-PWY|ILEUDEG-PWY|PWY-5108}}
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** [http://www.uniprot.org/uniprot/Q9JTU7 Q9JTU7]
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** [http://www.uniprot.org/uniprot/Q10730 Q10730]
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** [http://www.uniprot.org/uniprot/P15541 P15541]
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** [http://www.uniprot.org/uniprot/P37897 P37897]
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** [http://www.uniprot.org/uniprot/P37896 P37896]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=aminopeptidase_n}}
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{{#set: common name=membrane_aminopeptidase_i}}
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{{#set: ec number=EC-3.4.11.2}}
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{{#set: gene associated=Tiso_gene_16906|Tiso_gene_860}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:36, 21 March 2018

Gene Tiso_gene_3260

  • right end position:
    • 11548
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 10034
  • centisome position:
    • 58.520935
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PHOSNACMURPENTATRANS-RXN&oldid=35147"