Difference between revisions of "P105-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3035 TAX-3035]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
−
** thiamine salvage IV (yeast)
+
** TCA cycle IV (2-oxoglutarate decarboxylase)
 
* Synonym(s):
 
* Synonym(s):
−
** thiamin salvage IV (yeast)
+
** citric acid cycle
 +
** tricarboxylic acid cycle
 +
** Szent-Gyorgyi-Krebs cycle
 +
** Krebs cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''5''' reactions found over '''7''' reactions in the full pathway
+
  '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PYRIMSYN3-RXN]]
+
* [[ACONITATEDEHYDR-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13007]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
* [[ACONITATEHYDR-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13007]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[CITSYN-RXN]]
 
** 4 associated gene(s):
 
** 4 associated gene(s):
−
*** [[Tiso_gene_2159]]
+
*** [[Tiso_gene_18030]]
−
*** [[Tiso_gene_2160]]
+
*** [[Tiso_gene_9601]]
−
*** [[Tiso_gene_16224]]
+
*** [[Tiso_gene_9603]]
−
*** [[Tiso_gene_17192]]
+
*** [[Tiso_gene_9602]]
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
−
*** [[orthology-athaliana]]
+
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
 +
*** [[Tiso_gene_6720]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[RXNQT-4191]]
+
*** [[annotation-in-silico_annotation]]
−
** 5 associated gene(s):
+
−
*** [[Tiso_gene_17610]]
+
−
*** [[Tiso_gene_4497]]
+
−
*** [[Tiso_gene_15256]]
+
−
*** [[Tiso_gene_17625]]
+
−
*** [[Tiso_gene_11838]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-esiliculosus]]
+
−
* [[THI-P-SYN-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_10320]]
+
−
*** [[Tiso_gene_2159]]
+
−
*** [[Tiso_gene_2160]]
+
−
** 3 reconstruction source(s) associated:
+
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[ISOCIT-CLEAV-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_14008]]
 +
** 3 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[THIAMIN-PYROPHOSPHOKINASE-RXN]]
+
* [[ISOCITDEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18262]]
 +
*** [[Tiso_gene_10809]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
 +
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[MALSYN-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_16512]]
+
*** [[Tiso_gene_14377]]
−
** 2 reconstruction source(s) associated:
+
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[THIAZOLSYN3-RXN]]
+
* [[SUCCSEMIALDDEHYDROG-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_3173]]
+
*** [[Tiso_gene_6952]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
−
*** [[orthology-esiliculosus]]
+
*** [[orthology-synechocystis]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=OHMETPYRKIN-RXN OHMETPYRKIN-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
−
* [http://metacyc.org/META/NEW-IMAGE?object=THIAMINASE-RXN THIAMINASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7774 RXN-7774]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: taxonomic range=TAX-1117}}
−
{{#set: taxonomic range=TAX-4751}}
+
{{#set: taxonomic range=TAX-3035}}
−
{{#set: common name=thiamine salvage IV (yeast)}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: common name=thiamin salvage IV (yeast)}}
+
{{#set: taxonomic range=TAX-201174}}
−
{{#set: reaction found=5}}
+
{{#set: common name=TCA cycle IV (2-oxoglutarate decarboxylase)}}
−
{{#set: total reaction=7}}
+
{{#set: common name=citric acid cycle|tricarboxylic acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
−
{{#set: completion rate=71.0}}
+
{{#set: reaction found=9}}
 +
{{#set: total reaction=11}}
 +
{{#set: completion rate=82.0}}

Latest revision as of 20:08, 21 March 2018

Pathway P105-PWY

  • taxonomic range:
  • common name:
    • TCA cycle IV (2-oxoglutarate decarboxylase)
  • Synonym(s):
    • citric acid cycle
    • tricarboxylic acid cycle
    • Szent-Gyorgyi-Krebs cycle
    • Krebs cycle

Reaction(s) found

9 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=P105-PWY&oldid=39714"